Xenopus tropicalis (tropical clawed frog): 100487479
Help
Entry
100487479 CDS
T01011
Symbol
trim27
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
TRIM_CC
zf-RING_UBOX
DUF7801
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Fib_alpha
ANCHR-like_BBOX
HTH_SUN2
TEX13
BAR_3
Motif
Other DBs
NCBI-GeneID:
100487479
NCBI-ProteinID:
XP_004919612
Xenbase:
XB-GENE-22069379
UniProt:
A0A1B8Y3F0
LinkDB
All DBs
Position
6:complement(6532148..6537792)
Genome browser
AA seq
527 aa
AA seq
DB search
MAAANVEEEVTCCVCRNIYRDPVTLPCGHSVCIACVCFLWDFEGFGDEDCYICPKCEQRY
SGSPEAKLNHELCNSANRFLRSHQRKGDTRIFCCQCDPPVPATKSCVQCEVSLCDTHMGD
HSDPTQHSLIAPTHDFSDRKCSVHHQILEYYCWEDLAFMCESCSLSGGHRGHRVQRLDEA
SEAKKGKLKEILHKLTPKTMETDQKIQSLSKHKKIVKKSAKNNDMQVTKLFRDIREQLEN
LEEKIVTEIIEQRKKGWEMMSDLIDVLQNKKYSLEWKIVQYGRLCASSDHVTVLREQEAE
AEALCGVEEEDNVADGKKLPVVGDLDERLISGKLSAAITDVTNVIHAIGIYGREATGLSL
DTDTASNNLALSHNRKSVSHTHTRQNLPQTPGRFQVAQALCTRSFSSGKHYWEVEGSETG
GWRIGVAYPSIDREGDQSYIGFNNKSWALCKFYNNYSVIHNGERKGLAMPPSCQRIRIFL
DYEAGCLSFYELSYPIRHLHTFTASFSEPLQPVLWVAEGGGWVRMLS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctaatgtggaagaggaggtgacatgctgtgtgtgcagaaacatttacaga
gatccggtaacacttccgtgtggccatagcgtctgcatagcctgtgtttgcttcctatgg
gacttcgaagggtttggtgatgaagattgttatatctgccctaaatgtgagcagagatac
agcgggagtccagaggcaaagttaaaccatgagctgtgtaattcagcaaatcggttccta
cgatcccaccagaggaagggcgacactcgcatcttctgctgtcagtgtgaccctcctgtt
cctgcaactaaatcctgtgtgcagtgtgaggtctctctgtgtgacacccacatgggggat
catagtgacccaactcaacattcacttattgccccgacccatgacttttcagacaggaag
tgctctgtgcatcatcagatcctggagtattactgctgggaggatttggcctttatgtgt
gagtcctgcagcctctccggggggcacaggggccacagggtgcagcggctggatgaggcg
tccgaggcaaagaaagggaaactaaaagaaattttacacaaactgaccccaaagacaatg
gagacagaccaaaagatacagagtttaagtaagcacaaaaaaatagtgaaaaaaagtgca
aagaataacgacatgcaagtgactaagttgtttagggacatcagagagcaactggaaaac
ctagaggagaaaattgtgaccgagatcattgagcagaggaaaaaaggatgggaaatgatg
tctgaccttatagatgtactgcaaaacaagaaatattcattggaatggaagatcgtgcaa
tatggaaggttatgtgccagttctgatcatgtgactgtactgagggaacaggaagcagag
gcagaagccttgtgtggcgttgaggaggaggacaatgtggctgatgggaagaagctccca
gttgtcggtgacctggatgagcggctgatctcagggaaactaagtgcagctataaccgat
gttactaatgtcatacatgccatagggatctatgggcgggaggcgactgggctgtcactg
gatacagacacagcctctaataacctagcgctgtcccataataggaaaagtgtgtcccac
acacacacaaggcagaacctgccccaaactccagggaggttccaggtggctcaggcttta
tgcaccaggagctttagctcagggaaacactactgggaggtggagggcagtgagactggg
ggctggcgtattggggtggcctatcccagtatagatagggaaggggatcaatcgtacatt
gggtttaataacaagtcctgggctctgtgtaagttctataataactactcagtgatacat
aatggggaaaggaagggtttggctatgcccccctcctgccagagaatcagaatatttctg
gattatgaggccggatgtctgtccttttatgagctgagttacccaatcagacacttacac
acctttactgcctccttctctgagccgctccagcctgtattgtgggtagctgagggggga
ggctgggtcagaatgcttagctag
DBGET
integrated database retrieval system
