Xenopus tropicalis (tropical clawed frog): 100487527
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Entry
100487527 CDS
T01011
Symbol
calca
Name
(RefSeq) calcitonin gene-related peptide 2 isoform X1
KO
K12332
calcitonin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04081
Hormone signaling
xtr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100487527 (calca)
04081 Hormone signaling
100487527 (calca)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
100487527 (calca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100487527 (calca)
Cytokines and neuropeptides [BR:
xtr04052
]
Neuropeptides
GPCR binding
100487527 (calca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calc_CGRP_IAPP
DUF2894
Motif
Other DBs
NCBI-GeneID:
100487527
NCBI-ProteinID:
XP_031756235
Xenbase:
XB-GENE-6461042
UniProt:
A0A803K560
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Position
4:complement(3275140..3289982)
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AA seq
138 aa
AA seq
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MVVLKIWSLLAALALVLCQMPSSHAVPVRPGLEAAAERVAVSDYEARRLLSALVKEFVQM
TAEEMEQANEGNSPDRSISKRCSNLSTCVLGKLSQELHKLQSYPRTDVGAGTPGKKRNIL
PDMDSDRYSSYGEQFEHN
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atggttgtactgaagatctggtccctgcttgctgccctcgccctggtactgtgccagatg
cccagctcccacgcagtgcccgtcagacctgggctggaggcagcggcagagagagttgca
gtcagtgactatgaagctcgccggttactcagcgctttggtgaaagagttcgtacagatg
acggcagaagaaatggaacaagcgaatgaagggaacagcccggatagatccatttccaaa
cgctgctccaatctgagcacttgcgtcctggggaaactgtcgcaagagttgcacaagttg
caaagttaccctcgtaccgacgtgggcgctggtacccccggcaagaagagaaacattctg
cccgacatggacagtgaccgttacagcagctacggggagcagtttgagcataactag
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