Xenopus tropicalis (tropical clawed frog): 100487602
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Entry
100487602 CDS
T01011
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100487602 (cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100487602 (cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
100487602 (cntn1)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Contactins
100487602 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xtr00537
]
Others
100487602 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_2
Tissue_fac
Fn3_VIN3
T2SSB
Big_3_4
Motif
Other DBs
NCBI-GeneID:
100487602
NCBI-ProteinID:
XP_002932857
Xenbase:
XB-GENE-491714
UniProt:
A0A6I8SUU9
LinkDB
All DBs
Position
3:complement(65237795..65312480)
Genome browser
AA seq
1005 aa
AA seq
DB search
MWPVVTQLLIYFFFCWAEEGKRYGPVFEEQPIDTIFPEESMEGKVSVNCRARANPPPVYK
WRRNNWEIDLLNEHYSLVGGNLVINNPDKYKDSGKYVCIVSNMYGKVWSREANLNFGYLD
PFPTEERYEVKVKEGTGAVLICDPPPHFPDDLNYRWLLNEFPVFISPDNRRFVTQANGNL
YIAKVEQSDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRAL
KDQNVTLECFALGNPIPVITWRKTNEAMPASAEISMSGAVLKIFNIQPEDEGTYECEAKN
IKGMDTHKAYVYVEGVPEWVEHINDTERDIGSDLHWACVAKGKPQPSIRWLKNGASYGKG
DLIKRGLTLEDAGMYQCIAENMHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVII
ECKPKAAPKAKFSWSKGTELLINSSRVSIWDDGSLEILNITKLDEGSYTCFAENDRGKAN
STGVLSVTAATKITLAPSNADVTVGENATMQCHASHDPTLDLTFIWTLNGFPIEFDKEDG
HYERAIRNDVGSELVIKNAQLKHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEE
IRDTSVKLTWSSGTDNHQPISKYNIQAKNILSEDWKDVKTENPNIEGNMEMARAIDLIPW
MDYEFRVTATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTVTWQPLSREY
HYGDGFGYVVAFKLFNYREWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKVGEGP
YSSTVVIYSAEDVPIEAPTAIVYNILSSSEVSVAWHPVYEKSIEGYQVRYWRTQDKEAAA
HRVQVKASDITTRLEGLLPDTHYNLEVRAFNSAGDGPPSRVITFLTKKAPPSQKPRITSA
VRYGSQYIITWEHVVPLSNESAVNGYKVLYRQDGQRDGKLYSTGKHSVELPVPEEGEYVV
EVRAHSEGGDGAVAYIKISGDATGILPSFLGILLPILSLLMYWEF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctgtagtaacccaactgttgatatacttcttcttctgctgggcggaggaagga
aaaagatatggacctgtctttgaagaacaaccaattgacactatttttcctgaagaatct
atggaaggcaaagtctcagtgaactgcagagctcgagcaaaccctcctcctgtttacaag
tggagaaggaataattgggagatagaccttcttaatgagcattacagtttggtgggtggt
aaccttgtcatcaacaatccagacaaatacaaagattctgggaaatatgtttgcattgtc
tcaaatatgtatgggaaagtctggagtagagaagccaatttaaactttggatatctggat
ccgttcccgacagaggaacgctatgaagtaaaagtgaaagaaggaactggagccgttctc
atatgtgatccccctccacatttccctgatgatcttaattatcgctggcttttaaatgaa
tttcctgtgttcatttcacctgataatagaagatttgttacacaagcaaatggaaattta
tacattgcaaaagtggagcaatcagaccgaggcaattactcatgttttgtctccagccct
tctgttaccaaaagtgtattcagcaaatttatttcactacttccacaaactgacacttca
gagaaacctaaacgttatacacctgttattaatgtcaaatttaaagacactcgtgccttg
aaagatcaaaacgtcacactggagtgttttgctttgggaaatcctattcctgtaatcaca
tggagaaaaacaaatgaggcaatgccagcttcagctgagataagcatgtctggggctgtc
ttaaagattttcaatatccagcccgaagatgaaggaacgtatgagtgtgaagctaaaaac
attaaagggatggacacacacaaagcatatgtatatgtagaaggtgtgccagaatgggta
gaacacatcaatgatacagaaagagatataggcagtgatttgcactgggcctgtgttgct
aaaggcaagccacagcctagcatcagatggctgaaaaacggagcatcgtatggaaagggt
gacctaataaagagagggcttactttggaagacgctggaatgtatcagtgcatagcagaa
aatatgcatggaattatttatgcaaatgctgagttaaagattctcgctttagcaccaaca
tttgaatttactcctatgagaaagaaagttttagctgccaaaggaggacgtgtaatcatt
gagtgcaagccaaaagctgctccaaaagccaaattttcatggagtaaggggacggaactg
ctcataaacagcagtcgcgtatcaatctgggatgatggtagcctagaaattctgaacata
acaaagcttgatgaaggcagctatacttgttttgcagaaaatgacagaggaaaagcaaat
agcactggagtactctctgttacagctgccacaaagataacccttgcaccttcgaatgct
gatgtgactgttggtgaaaatgcaaccatgcagtgtcacgcatctcatgaccccacattg
gaccttacatttatctggactttaaatggtttcccaattgaatttgacaaggaggatgga
cattatgaacgggctataaggaatgatgttggtagtgaacttgttataaaaaatgcacaa
cttaaacatgctgggagatatacttgcacagcacaaacaattgttgacaactcctcagct
tcagctgatcttgtagtcagaggtccccctggtccaccaggtggtgtcagagtagaagaa
ataagagatacttctgttaaattaacatggagtagtggaacagacaatcaccagccaatt
tccaagtataatattcaggcgaaaaacattctgtctgaagactggaaagatgtaaagaca
gaaaatccaaacattgaaggaaatatggaaatggcaagagctatagatttgattccttgg
atggactatgaatttcgggttacagcaacaaacacattaggagttggagaacctagtttg
ccatcaccaaaaataagaacagagggagctgcacctattgtagctcctgctgaagttggg
ggtggtggtggaagcaatcgtgagttaacagtaacttggcagcctttatcacgtgaatat
cattatggggatggctttggctatgttgtcgccttcaagcttttcaattacagggaatgg
agaaaagttattgttacaaaccctgaaagtggtcactatgtgcacaaagatgacaccata
acgccagcaacacagtttcaagtaaaagtaaaggcctttaataaagttggtgaaggtcca
tacagcagcactgttgttatatactcagccgaggatgtacctatagaagccccaacagca
atagtatacaatatactgtcatcttctgaagtatctgttgcctggcacccagtttatgag
aaatctattgaaggttaccaggttcgctactggcgaactcaagacaaagaagcagcagca
catcgagtacaggtgaaagcttcagatattacaaccaggcttgaaggattgttgccagat
acccattacaacttagaagttcgggcctttaatagcgcaggggatgggccgccaagcaga
gtgataactttcttgacaaagaaagctcctccaagtcaaaaaccacggattactagtgct
gtgagatatggttcacagtatattatcacctgggaacatgtagtacctctatccaatgag
tctgctgtgaatggttacaaggttctttacagacaggatgggcagcgagatggaaagctc
tattcaactggtaaacattcagtagaattacctgtcccagaagaaggagagtatgttgtt
gaggttcgagctcacagtgaaggaggtgatggagcagttgcttacattaaaatttctggt
gatgcgacaggaattctcccctctttcctcggaatccttctgccaatcctaagcctgctg
atgtattgggaattttga
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