Xenopus tropicalis (tropical clawed frog): 100487768
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Entry
100487768 CDS
T01011
Name
(RefSeq) RB-associated KRAB zinc finger protein isoform X2
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100487768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487768
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100487768
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
KRAB
zf-met
Zn-ribbon_8
C1_1
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
100487768
NCBI-ProteinID:
XP_004917031
UniProt:
A0A6I8QC45
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All DBs
Position
8:complement(71388328..71401390)
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AA seq
471 aa
AA seq
DB search
MQHLTNPKLEMKEMEKKQITDQILKHALGIIYLLTEEASLLQHIIDSLLIKERNNKQLSE
RILNHALGIIYLLSGEEYAIVKKNSPHSSIHHLTGEVPITSGDVSIYFSMDEWDYIEGHK
ELYKDLMEKYQNYSAVEISDIQKSEIQDENTNNMCLTHSKETEEENDLVEAEIESNICSD
ECTAGLVSDVEDTEQPSLKKENESPELVAQETTSTWQSILEDGSVSRNILSPHSASRLSD
KKLENITSTSPMFQGKHQEQNLPADSTICNTENCTSSSISYQCSKTKAQETGNVEWNSIE
VKLEMSSDSESSSQEQSCRNFQSLHEDETEGEKIHKCNVCGKQFGYKCYLTVHLRTHTGE
KPHKCDECGKYIASKAKLIIHQRTHTGEKPYSCKECGKQFRSKPYLVEHMRSHTGEKPHR
CDDCGKQFAYKSRLIVHQRTHTGLKPHRCYQCGKHFDYVCYLIRHLKTHKW
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatctaaccaatcctaaactagaaatgaaggaaatggagaagaaacaaataaca
gatcagatcttgaagcatgctttgggtattatatacttgctgactgaagaggcttcactc
ttacagcacataattgactcattgttgataaaggagaggaacaataaacagttaagtgaa
agaatcttgaaccatgcacttggaatcatctacttactcagtggtgaggaatatgctatt
gtgaaaaagaattcaccccacagcagcattcatcatttgactggagaagtacctataaca
tctggagatgtctctatttatttctctatggatgagtgggattatattgaaggacacaag
gagctgtataaagatttgatggagaagtatcagaactatagtgctgtggaaatctcagat
atccagaaatctgaaatacaagatgaaaataccaacaatatgtgccttacccatagcaag
gaaacagaagaggagaatgatttggttgaagctgaaattgaatccaacatctgttcagat
gaatgtactgctggacttgtatcagatgtagaagatacagaacagccaagtttaaagaaa
gaaaatgaatctcctgagcttgtggctcaagaaactacatctacctggcaatccatactt
gaagatggatctgttagcagaaatattctaagtccacactcagcatccagactgtcagat
aaaaaattggaaaatattaccagtacatctcctatgtttcaaggcaaacatcaagaacaa
aatctacctgctgactcaaccatttgcaatacagaaaactgcacctcttcaagtatttct
tatcaatgtagcaaaacaaaagctcaggagactggtaatgttgagtggaacagtatagag
gtaaagctagaaatgagcagcgatagtgaaagttctagtcaagagcaaagttgcagaaat
ttccagtcactgcacgaagacgaaaccgaaggagagaagatccataagtgtaatgtgtgt
ggaaagcaatttggatacaagtgttatctgactgtacatctgagaacacacacaggagag
aagccgcataagtgtgatgaatgtggaaaatacattgcctcaaaagctaaacttattatt
caccagagaacacacacaggggagaaaccatatagctgtaaggaatgtgggaagcaattt
cgttcaaagccttatcttgttgaacacatgagatcacacacaggggagaagccacataga
tgtgatgattgtgggaagcagtttgcttacaaatccaggttaattgtacatcaaagaaca
catacagggttaaaacctcatagatgttatcaatgtggaaagcactttgattatgtatgt
tatcttataagacatttgaaaacacacaaatggtaa
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