Xenopus tropicalis (tropical clawed frog): 100487879
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Entry
100487879 CDS
T01011
Symbol
hoxc5
Name
(RefSeq) homeobox protein Hox-C5
KO
K09305
homeobox protein HoxA/B/C5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487879 (hoxc5)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100487879 (hoxc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100487879
NCBI-ProteinID:
XP_002936695
Xenbase:
XB-GENE-485672
UniProt:
F7BDW3
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All DBs
Position
2:complement(146059451..146063927)
Genome browser
AA seq
225 aa
AA seq
DB search
MSSYVANSFYKQSQNVPAYSMQSYGNYGSVSEVPSSRYCYSGLDLSITFPSPGSSNSLSA
LDMPSNPNANSERPSCTVMGSSGHTVGRGEQSALNSGIYNQKAATTSLEERSKGIESIKT
EPAQSTPQGGQPQQQQQQQPPQIYPWMTKLHMSHETDGKRSRTSYTRYQTLELEKEFHFN
RYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDTKVKSKDSM
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtacgtagccaattcattctataagcaaagtcaaaatgttccagcctattcc
atgcaaagttatgggaattatggatctgtatccgaggtcccttcatccaggtattgctac
agtgggttggatctgagcattacattcccttctcctggttcctctaactctctgagcgct
ctggacatgccttcaaacccaaatgctaactctgagcggccttcctgcactgttatgggt
tcttctgggcacactgtgggaagaggagaacagagtgcactcaactctgggatttacaat
cagaaagctgcgactacatcgctggaggagagatctaaagggattgagagcatcaaaact
gagccggcacagagcactccacaaggtgggcaaccccagcagcagcagcagcagcagcca
ccacaaatatatccttggatgaccaaactgcacatgagccatgaaacggacgggaagcgt
tcccggacaagttacactcgataccagaccctggagctggagaaggaattccactttaat
agatacctgactcgccgaaggcgcatagagatcgccaacaacctctgtctaaacgaaagg
cagatcaaaatttggttccagaaccgacggatgaaatggaagaaagatacaaaagtcaag
agcaaagactccatgtaa
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