Xenopus tropicalis (tropical clawed frog): 100487950
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Entry
100487950 CDS
T01011
Symbol
rph3a
Name
(RefSeq) rabphilin-3A isoform X2
KO
K19938
rabphilin-3A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100487950 (rph3a)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100487950 (rph3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
FYVE_CARP1-2
JetD_C
zf-piccolo
HD_5
Motif
Other DBs
NCBI-GeneID:
100487950
NCBI-ProteinID:
XP_017946079
Xenbase:
XB-GENE-5881709
UniProt:
A0A6I8SDA1
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All DBs
Position
1:163895254..164012335
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AA seq
699 aa
AA seq
DB search
MTDTVIGNSSNRWMCPNDKMALRSKLDAGWSVHPNNQERQRKHEELTDEEKEIINRVIAR
AAKMEEMEQERIGRLVDNLEDMRKTVTGDGVNRCILCGEQLGLPGTKCVVCEDCKKNVCT
KCGVQSNSRPHSIWLCKICSEQREVWKRSGAWFFKGFPKHVLPQPIPVNKSKPQKPSAVS
EDSGQEQKRYPRTQSRGDYSFTAQVELAAQPDQEPYETESTAANPGRTNYPPPARKAESR
MAPSGSEYEGEETRDSSYGGVDNDINRSPGGVKRGSSVQGTRPTSAVQGSNIQPTQQAPP
ASARPAARPTPANRFPEEQGGTTLPASQPESTYSASVPRNEKADSFTPQGVRQDRPLRQA
ASYTSSVPTVAAPSARQPQTQDEEEEEANSYDSDEATTLGSLEFSLFYDQENNSLHCGII
KAKGLKPMDSNGLADPYVKLHLLPGASKANKLRTKTLRNTRNPIWNETLVYHGITDEELQ
RKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQKKSFNVCLERVIPMKRAGTTGSVRGM
ALYEDENDRGGDVEERGKILVSLMYNTQQGGLIVGIVRCVHLAAMDANGYSDPFVKLWLK
PDMGKKAKNKTQIKKKTLNPEFNEEFFYEIKHSDLAKKQLDVSVWDYDIGKSNDYIGGCQ
LGINAKGERLKHWYECLKNKDKKIERWHVLQNENHVASD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacagatactgtgattggaaacagttctaaccgctggatgtgccccaatgacaaaatg
gcgctccgttccaagcttgatgctggatggtcagtacacccaaataatcaagaacggcaa
cgaaaacatgaagaacttacagatgaggaaaaggaaattattaacagagttatagcacga
gcagcgaaaatggaagagatggagcaagaacgtattggtcgattggttgacaatcttgaa
gacatgaggaaaacggtgactggtgatggggtgaatcgttgtatcctctgtggggaacag
ttagggctgccaggaacaaagtgtgtagtatgtgaagactgcaaaaagaatgtttgcaca
aaatgtggtgtgcagtccaacagtcgtccccattccatatggctgtgcaaaatatgcagc
gagcagcgggaggtgtggaaaaggtctggtgcatggttctttaaaggtttccccaagcat
gttctaccgcagccaataccagtgaacaaatcgaagcctcagaagccgtctgctgtatca
gaggattctggtcaagagcagaaacgctaccctcgcactcagagtcgaggtgactattcc
tttactgcccaagtggagcttgctgctcagccagaccaagaaccctatgaaacagaatca
actgctgccaatccaggaagaaccaattaccctcctcctgctcggaaggcagagtcaaga
atggcaccaagtggtagtgaatatgagggagaagaaaccagagacagctcatacggtggt
gtagacaatgacataaacagaagcccaggaggtgtgaaacgtggcagttcagtgcaggga
acaagacctacctctgcagtccaaggaagtaacatacagcctacccaacaagcacctcca
gcaagtgctagaccagcagcaaggccaactcctgcaaacagatttccagaagaacaaggt
ggcactacccttcctgcttcacagccagagtcaacctactctgcatcagttcctagaaat
gagaaagctgatagtttcacgccacaaggtgtaagacaggatcgtccccttcgacaggct
gcgtcgtacacttcatctgttccaacagtggcagcgccttctgcacggcagccacaaaca
caagatgaagaggaggaggaagcaaatagctatgactccgatgaagcaaccacacttggc
tctctggaatttagtcttttctatgaccaagaaaacaattctttacattgcggtattatc
aaagcaaagggcctaaaacccatggactccaatggtttagctgatccttatgtaaagctg
catcttctaccaggagctagtaaggctaacaaattacgtactaagactctgagaaacaca
cgcaaccctatatggaatgaaacccttgtgtatcatgggatcactgatgaagaactgcag
aggaaaactttaagaatctctgtctgtgatgaggataagtttggccacaatgagtttatt
ggtgaaacaagattttccttgaagaagctgaaaccaaaccagaaaaagagcttcaatgtt
tgcctggagcgcgtgattccgatgaaacgtgctgggactacaggatctgttcgtggaatg
gctctctatgaggatgaaaatgatcgtgggggagatgttgaagaacgagggaagatttta
gtgtctttaatgtacaatacccagcaaggaggtctgattgtggggatcgtacgttgcgtt
cacttggcagcaatggatgctaatggctactctgacccttttgttaaactgtggctgaaa
cctgacatgggaaagaaggcaaaaaacaagactcaaataaagaaaaaaacactaaatcca
gaatttaatgaagaattcttctatgaaatcaagcacagtgatttggccaagaagcagctg
gatgtttctgtgtgggattatgacattgggaaatccaatgattacattggtggatgtcag
ctgggcatcaatgctaaaggagagcggttgaaacactggtacgaatgcttgaaaaacaaa
gataagaaaattgaacgttggcatgtcctacagaatgaaaatcacgtggcaagtgactaa
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