Xenopus tropicalis (tropical clawed frog): 100487962
Help
Entry
100487962 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF7.1-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100487962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100487962
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100487962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_6
C2CH-3rd_BIRD-IDD
DUF384
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
100487962
NCBI-ProteinID:
XP_012808901
UniProt:
A0A8J0SCG1
LinkDB
All DBs
Position
9:complement(3067902..3070367)
Genome browser
AA seq
583 aa
AA seq
DB search
RILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPGSVIQKENDKKILELISNIIQLLT
GEEPENLNKDSVLSKEEIKVEEEEPQQLRPLACEYKDGSDVTAHTEATLCCNNDGNLTNP
DVSPAEQPPPANGIKEEAASWEEGNQSDCSINPLTEQIQGTDTPTPIMGCSLNISEGIKE
EPASCKEENQSEYNIITVSEPVRRNDIMGCSLNNSSAEDYISVVVKEEPASAEEDNHFAD
QIQLIDKSTVMGWSLDYSSADNYISYDNKEKAASWEGGNQSDCSINPLTEQIQGTDTPTP
IMGCSLNNSPIKMKGNKYNENVTSSPHKSHIAKNPSSHNERSFDTPQGIQTGEKRFPCSE
CGKCFASQKYLSFHSRIHTEQKPYSCHECGKSFSSQLSLDRHHRTHTGEKRFFCSECRKY
FANSSLLRVHEQRTHTGEKPFSCSECGKCFINESELTVHRRRTHTGEKPFVCSDCGKCFL
SSSNLTVHYRTHTGEKPYPCSYCGKRFATSSAVFSHRQRIHIGEKPFSCSECGRSFMKPS
ELTVHQRIHTGEKPFSCSECGKCFARKGSLKTHVFEIHTEGKP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
agaatcctgaatctcacactggagattatctatctgctgactggagagggctacgtcatc
cctaagaagaagagcccaactgtgggtttgggggccctgcatgcccctggctccgtcata
cagaaggaaaatgacaagaagatcctggaactcatctccaacatcatccagctgctgact
ggagaggagccggagaatttgaataaagacagtgtcctcagcaaagaagagataaaggtg
gaggaggaggagccccagcagctccgcccactggcctgtgagtataaagatgggagcgat
gttacagcacatacggaagcaactttatgttgtaataatgatgggaatctcacaaaccct
gatgtttctccagcggaacagcccccaccggccaatgggattaaagaggaggcggcttca
tgggaagagggaaaccaatcagattgcagcattaatccccttacagaacagatacaggga
acagacacacctactcctatcatggggtgcagcctgaatatatcggagggtattaaagag
gaaccggcttcctgcaaagaggaaaaccaatcagaatataatattattacagtttcagaa
ccagtacggcgaaacgatatcatggggtgcagcctgaataacagctcggcagaggattat
atatcagttgttgttaaagaggaaccggcctcagctgaagaagataaccattttgcagac
caaatacaattaatagataagtcgactgtcatggggtggagcctggattacagctcggca
gataattatatatcatatgacaataaagagaaggcagcttcatgggaagggggaaaccaa
tcagattgcagcattaatcctcttacagaacagatacagggaacagacacgcctactcct
atcatggggtgcagcctgaataacagccctataaaaatgaagggtaataaatataatgaa
aatgtgactagctccccccataaatctcacatagcaaaaaatccatccagccacaatgag
cgaagctttgatacccctcaaggaatccaaacaggagagaaacgattcccttgttctgag
tgtgggaaatgttttgcttcccaaaaatatcttagtttccattcgagaatccacacagaa
cagaaaccttattcctgccatgaatgtgggaaaagtttttcgagccaattgagccttgat
cgtcatcacagaacccacacaggggagaaacgattcttttgttctgaatgtaggaaatat
tttgcaaactcatcacttctaagagtccatgaacaacgaacccacacaggggagaaacca
ttttcttgttccgaatgtgggaaatgttttattaatgaatcagaactcactgtccatcga
cggcgaacccacacaggggagaagccatttgtatgttctgattgtgggaaatgttttctc
agctcatcaaaccttactgttcattacagaactcacacaggggagaaaccttatccctgt
tcttattgtgggaaacgttttgccacttcatcagccgtcttttcccatcgacaaagaatt
cacattggggagaaaccattttcctgttccgaatgtgggagatcttttatgaagccatca
gaactcactgtccatcagagaattcacacaggggagaaacctttttcctgttctgagtgt
gggaaatgttttgcacgtaagggcagccttaaaacacatgtttttgaaattcacacagag
ggaaaaccatag
DBGET
integrated database retrieval system
