Xenopus tropicalis (tropical clawed frog): 100488028
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Entry
100488028 CDS
T01011
Symbol
cercam
Name
(RefSeq) inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr00514
Other types of O-glycan biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100488028 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100488028 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100488028 (cercam)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100488028 (cercam)
Glycosyltransferases [BR:
xtr01003
]
O-Glycan biosynthesis
O-linked Gal type
100488028 (cercam)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
100488028
NCBI-ProteinID:
XP_031747372
Xenbase:
XB-GENE-6044221
UniProt:
A0A6I8SZG6
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Position
8:25844035..25851700
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AA seq
683 aa
AA seq
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MGKVPPKGYTIHIIYPPPPAKPHSGLTRPAIRLRCWLRCCEGFAGPTGGYRVGYRLPGWL
SQYLPRLPPSPLPRAVPPRLPPATLTRPARYCWMAQAAVLLLLPGLVLAAGQIQSPEPGQ
QGPPSLVIALIARNAAHALPYSLGALERLDYPRDRISLWCATDHNEDATLDVLQDWLEAI
RPLYHSLEWKAEVAPRWYPQETGPKDWPKERYEYVMKLRQEALSYAREKKADYIMYVDAD
NVLTNVHTVRLLMTENKTLVAPMLDSQTGFSNFWCGINPQGFYRRTPDYYPTRNRQRTGC
FSVPMVHSTFLIDLQKEESHGLAFYPLHPNYTWTFDDIIVFAYSCLAAGVQGYVCNTHRY
GYVNVPALPHQEIKDDELNFVHLMMEAMVDGTPFRSSQFVYPQPKNPDKMEFDEIFLINL
RRRPERRERMLRSLYEQEISCHVIDAIDGGAMNSSDIKHLGVNLLPGYYDPFSGRTLTKG
EVGCFLSHFQIWKEITERQLDTAVVFEDDVRFQPFFKRKMIRLMGDIRSAELDWDLIYIG
RKQVTLDPEQPVENVPHLVVADYSYWTLCYIISLQGAQKLLNAEPLSKMLPVDEFLPIMS
DTHPNKEYKQHFVNRNLRVFSVHPLLVYPTHYTGETSWQSDTETSTLWDNDNVRTDWSGS
QKTLKDTRGDSHPVLHPASHDEL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagtgccgcccaaaggctacacgattcacattatatacccacctccccccgcc
aagccacacagtgggctcacccggcccgccattaggttacggtgctggttaagatgctgt
gaggggtttgctgggcccactggggggtatagagtgggctacaggttgccaggttggctg
agtcagtacctcccacgtctcccaccctcacccctcccccgggccgtccctcccagactc
ccccctgctaccctgacacgtcccgcccggtactgctggatggcccaggccgctgttctg
ctcctacttccgggcctggtgctggctgctgggcagatccaatccccggagcccggccag
cagggtcccccttccctggtcatcgcactgattgcccgtaacgctgcacatgcgctgccc
tacagcctgggggcgctagagaggttggactaccccagggatagaatctcactctggtgt
gccacagaccacaatgaggacgccacccttgatgtgctgcaggattggttggaagccata
cggccattataccactctctggagtggaaagcagaagtggcacccaggtggtaccctcag
gagactggacctaaggactggcctaaagagcgctacgagtatgtaatgaagctgaggcaa
gaggcactgagctatgcacgggagaagaaggctgattatatcatgtacgttgatgcggat
aacgtcctgaccaatgtacacacagtgcggctgctgatgacagagaacaagacccttgtg
gcccccatgttggactcccagaccggcttctctaacttctggtgtggtataaaccctcag
gggttctaccgccgcactcctgattattaccccactaggaatcgccagcgcaccggttgc
ttctctgttccaatggtccactctacattcctcatagacctgcagaaggaggaaagccat
ggactggccttttacccactgcaccccaactacacatggacctttgatgatatcattgtg
tttgcctactcctgtctggcagcaggtgttcagggttatgtgtgcaacacccaccgctat
ggctacgtcaatgtcccggcactgcctcatcaagagataaaggatgatgaactgaacttt
gtgcaccttatgatggaggctatggtggacgggactccattccgctcatctcagtttgtg
tatccacaacccaagaaccccgacaaaatggaatttgatgagatcttccttattaacctg
cgccgccgcccagagcgacgggagaggatgctgcgctctctgtatgagcaggagatctca
tgccatgtcatagatgccattgatggaggtgccatgaacagcagtgacataaagcacctg
ggtgtcaacctgctccctggatactatgacccgttctcgggccgaacacttaccaagggg
gaagttggctgcttccttagccatttccagatctggaaagagatcacagagcggcagctg
gatacagcagtcgtttttgaggatgatgtgcgtttccaaccattcttcaagcggaagatg
attcgccttatgggggatattcgcagtgcagagctggactgggatttgatttacataggg
aggaagcaagtgaccttggacccagaacagccagtggaaaacgtgccgcacttagtggtt
gccgattactcctattggaccttgtgctacatcatctccttgcagggtgcccagaagctg
ctgaacgcagaaccgctctccaaaatgctcccagtggatgagtttctgccaatcatgtct
gacacacatcccaataaggagtacaagcaacactttgtgaacagaaacctgcgtgtgttt
tctgttcatccccttctcgtttacccaactcattacactggggagaccagctggcagagt
gatacggaaacctccaccctttgggacaacgataatgtaagaacagactggagcgggtcg
cagaagaccctgaaggacacaaggggagattcgcacccagtgctacaccctgcatcgcat
gatgagctgtga
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