Xenopus tropicalis (tropical clawed frog): 100488164
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Entry
100488164 CDS
T01011
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04621
NOD-like receptor signaling pathway
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100488164 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100488164 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100488164 (nod1)
Pattern recognition receptors [BR:
xtr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100488164 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
NOD2_WH
LRR_4
AAA_22
LRR_8
AAA_16
PIF1
Motif
Other DBs
NCBI-GeneID:
100488164
NCBI-ProteinID:
XP_002937900
Xenbase:
XB-GENE-990766
UniProt:
F6PKK5
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All DBs
Position
6:51322078..51351785
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AA seq
945 aa
AA seq
DB search
MLCQALTMSVKCPIRRSHVHSIRTSREELVNKIKNTNCLLENLTEHGFFSTEDAEIVMQF
STKSDRVRQILDLVESKGEEVSEYFLSVLQRIPEAYFNLKPWLEEICFQASEQILCLNVK
NNDPVTVFSRKIKHELCCDVKYIKSYTEREEMMLQETYVNGIMELISAANENMGRVQDLS
CLFDGNGVINEDGETIFVFGDAGMGKTLLIQKLQNMWAKGEYYCEIKFLFRFRCRTFSLF
KKTTLITLEDLLFKYNCNPDHEPEEVYRYILHFPETVLFTFDGFDEIHSDFDLNSVPEVS
SPFTQTHPVVLLSHLLSGKLLKGSKKVLTARTATHVPKNIIRKKIMLRGFSTENLHAYTS
LFFKESEIHKRVISHLKANHNFSSLCSIPLFCWIIFKSYEHFHSINDCQEFSSSSVTLTD
IFLLISEVYLNMSSKVFSVKGASRSQSETFKNGKDTLLSIGRLAYDGMERSMFVFDQDAV
TSLNISEKDLKLGFLRTVKVYSELGDHTSFEFFHMTLQSFFTALFLVINDKTGSAELLKY
FSQCTYTEDKELQHSPLSCICARRDRKEDPFKNNDHLQFINLFLCGLLSKPKQSLLKDIV
PPSILKMKRKALKQKLYKSVKSHLKSLPRSPFLEYNRVHALTHFIWMARCICETQSEKVG
KLAAKGICADYIKLSFCGASSSDCGAISFVLNHYHKKIALELDNNNINDYGVKELIPCFS
KLTVIRLSVNQITDEGAKVLYEELTKYKVITFLGLYKNLITDFGAQFIARIIEECPKLKR
VKLGYNRFTGEGGTYIGRAILNSTSICDIGMWGNEIGDVGACAFAEAITNHSSLTHLSLA
CNGISTEGGKSIAEALQQNTSLKILWLTENKLTDEAAEHFAKMVKVNKTLRHLWLVNNQI
TNHGAELLSEALQHNTVMEEICLQGNPLTLGENQPFEQNSRIFCI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgccaggctttgactatgtcagtcaagtgtcccattcgtcgatctcatgttcat
tcaataaggacaagccgagaagaacttgtaaacaaaataaaaaacaccaattgtcttctg
gagaacttgacagaacatggattcttttccactgaagatgcagagattgttatgcagttt
tcaacaaagtctgatagggttcgacagattcttgaccttgtggaaagtaaaggggaggaa
gtttcagaatattttctaagtgtccttcaaagaataccagaagcttattttaatttaaag
ccgtggttagaggaaatttgttttcaagcctctgaacaaatactttgtttgaatgttaaa
aacaatgacccagttacagtttttagcagaaaaataaaacatgagctgtgctgtgatgtg
aaatacattaagtcttacacagagagagaagagatgatgcttcaggaaacatatgtcaat
gggataatggaactgataagtgcagcaaatgagaatatgggaagagtgcaagatctcagc
tgtttgttcgatggcaatggagtgataaatgaagatggggaaacgatctttgtctttggt
gatgcaggcatgggaaagacgctgttgatccaaaagttgcaaaacatgtgggccaaagga
gaatactattgtgaaatcaaattcttatttaggtttaggtgcaggacatttagcttgttc
aaaaagactacattaataaccctagaggaccttctcttcaagtacaattgcaaccctgac
catgagccagaggaagtgtatagatatatactccattttccagaaactgtgttgtttact
tttgatggctttgatgaaatacattctgatttcgacttgaacagcgttccagaggtctcc
tcgccatttactcaaacccacccagtggtcttgctttctcacctgctgagtggaaaactg
ttgaaagggtccaagaaagttttgacagccagaacagcaacccatgtccctaaaaatata
atccgtaagaaaataatgctaagggggttctccacagaaaacctgcatgcatacactagt
ttattttttaaggaaagtgagattcataagcgtgtgataagccacctcaaagcaaatcac
aatttcagtagcttgtgttcaatacccctcttttgctggattattttcaaatcctatgaa
cattttcactctattaatgactgtcaggaattttcaagcagctcagtaacattaacagac
atctttttacttattagtgaagtttacctgaacatgtcaagtaaagttttttccgttaag
ggagccagtagaagccaatcagagacttttaaaaatggcaaggatacattattgtcaatt
ggaaggcttgcttacgatggaatggaaaggtccatgtttgtctttgatcaggatgctgtc
acatctctaaatatatctgagaaagacctcaaactgggcttcctcagaactgtgaaagtg
tacagcgaactaggtgatcatacatcttttgaattttttcatatgaccctgcagtctttc
tttacagccttgtttcttgtgattaatgacaaaactggcagtgctgaactcctaaaatat
ttcagccaatgcacttacacagaagataaagaacttcaacattcccctttgtcatgtata
tgtgcacgtagagacaggaaagaagatcccttcaagaataatgatcacctacaatttatc
aatctttttctctgcggcttgctctctaaaccgaaacagagccttttgaaggacatagtg
cccccatcaatactcaagatgaaaagaaaagctctgaaacagaaactttacaaaagtgtt
aaatcccacttaaaaagcctgcctcgctctccatttcttgaatataatcgtgtacatgca
ctgactcactttatttggatggcacggtgcatttgtgaaacacagagtgagaaagtggga
aaacttgccgccaagggaatatgtgcagactatattaaactaagtttctgtggagcatcg
tcatctgattgtggtgccatttcattcgtactaaatcattatcacaaaaagattgctttg
gaactagacaataacaacataaatgactatggggtaaaagaactcattccatgcttcagc
aagctcactgtaatcaggcttagtgtaaatcagatcaccgatgaaggggccaaagttttg
tatgaagaattgactaaatacaaggtcatcacctttctaggcttgtacaaaaatctcatc
actgattttggtgcacaatttattgcacgaattatagaagaatgcccaaaactaaaacgt
gtaaaattgggatacaaccgttttactggtgagggtggtacatacataggccgtgcaatt
ttgaacagcactagtatctgtgacattgggatgtggggaaatgaaattggtgatgttgga
gcttgtgcatttgctgaagcaattacgaatcactccagcttgacacatctaagccttgct
tgcaatgggattagcacagaaggcggaaaatcgattgctgaggccttacagcaaaacact
tcattaaaaatactctggctcactgagaacaagctgacagatgaagcggcagagcacttt
gccaagatggtaaaggttaacaaaaccctccggcacctgtggcttgtgaataatcagatc
acaaatcatggagctgaactgctgtccgaggccctgcagcacaacactgtaatggaggag
atctgtttacaaggaaacccactcacactaggggagaatcaaccatttgagcagaactcc
aggatcttttgtatctga
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