Xenopus tropicalis (tropical clawed frog): 100488172
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Entry
100488172 CDS
T01011
Symbol
krt54
Name
(RefSeq) keratin-3, type I cytoskeletal 51 kDa
KO
K07604
type I keratin, acidic
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100488172 (krt54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100488172 (krt54)
04147 Exosome [BR:
xtr04147
]
100488172 (krt54)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100488172 (krt54)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100488172 (krt54)
Exosomal proteins of other body fluids (saliva and urine)
100488172 (krt54)
Exosomal proteins of colorectal cancer cells
100488172 (krt54)
Exosomal proteins of melanoma cells
100488172 (krt54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF4407
Motif
Other DBs
NCBI-GeneID:
100488172
NCBI-ProteinID:
XP_002940703
Xenbase:
XB-GENE-22060964
UniProt:
A0A8J0QWN4
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All DBs
Position
10:8179377..8188722
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AA seq
448 aa
AA seq
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MFASYLMYCDMCKLRGWPCKGCRSFISGLDSGGFGGGFDGGFGGGSGGGFGGGAKAAYEV
TGTRGQYGGSVFGNKKETMQNLNDRLANYLDKVNALEAANAELERKIKEWYDKQPTTSDG
GKDYSKYYSLIDELNLKITNATKDNAGITLQADNARLAADDFNNKYENERALYQMMDNDI
NGLRRVVDDFTLSKFDLESQFEGLFEEMVFIKKKHDDEIKGTQNTKLSQVSVEMKAQPGT
DLTKILNDMRAQHEALAEKNRREAEDLYNTMTAELRQQISAGAGQMQASKTEISERKRTL
QALETDLHSKLSMKQSLELMLAETEGIYCMKLSRIQVTISSIEEHLAQLKADSESQHSQY
QQLLGIKTRLEQEIETYRRLLDGEGSKQTRDQGQGRGSGSERNSSVDKDVAGLGSIDSGG
GRTIRIKKTVENILDGKVVSMEEGVQKL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcttcctacctgatgtactgcgacatgtgcaaattaaggggctggccgtgtaaa
ggttgtaggtctttcataagtggtttagacagtggaggctttgggggtggctttgatggt
ggctttggtggaggctctgggggaggctttggtggaggtgcaaaggctgcctatgaagtt
actggtacaagaggacaatatggcggcagcgtctttgggaacaaaaaggagaccatgcag
aaccttaatgatcgtctggccaactacctggacaaagtgaatgcactggaggcggcaaac
gctgaactggaacggaagattaaagaatggtatgacaagcagcccactaccagtgatgga
ggaaaggactacagcaaatattactcattaatcgatgaactaaatctgaagatcactaat
gcaacaaaagacaatgcaggaatcaccctacaggctgacaatgccaggctggctgctgat
gacttcaacaacaagtatgagaatgagcgtgccctctaccagatgatggacaacgatatc
aatggtctacgtagggtcgtggatgattttaccctttcgaagtttgacctggaatcccag
tttgagggtctttttgaggaaatggtgtttatcaagaagaagcacgatgatgagatcaag
ggtacccaaaacactaaacttagccaagttagtgtggaaatgaaagcccagcctggtact
gacctgaccaagatactgaatgacatgagagctcagcacgaagcactggctgagaagaat
cgcagggaagctgaagatctttacaatacaatgactgcagaactgagacaacaaatatct
gctggggcgggacaaatgcaggcaagcaaaactgaaatctcagaacgtaaaagaacactc
caagctcttgaaaccgaccttcattcaaaactctccatgaaacaatctctggagttgatg
ttggccgaaactgagggcatctactgtatgaaactgtcaaggatacaggtgaccatttcc
agcatagaagaacatctggcacagctcaaagcagactcggagtcccaacactcccagtac
caacagctcttgggcatcaagacaaggctggaacaagagattgaaacgtatcgcaggctg
ctggatggagaagggagcaaacaaacaagagaccagggacaaggaaggggcagtggctct
gaaagaaatagcagcgtggacaaagacgtggctggtctaggctctattgattctggagga
gggagaaccatcagaattaagaagacagtggaaaatattttggatggaaaggttgtgtca
atggaggaaggggtacagaagttataa
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