Xenopus tropicalis (tropical clawed frog): 100488413
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Entry
100488413 CDS
T01011
Symbol
stxbp5
Name
(RefSeq) syntaxin-binding protein 5 isoform X2
KO
K08518
syntaxin-binding protein 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488413 (stxbp5)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100488413 (stxbp5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
100488413 (stxbp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_TEP1_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
Beta-prop_Vps41
WD40_like
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
100488413
NCBI-ProteinID:
XP_002936416
Xenbase:
XB-GENE-1012360
UniProt:
A0A8J0QR98
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All DBs
Position
5:complement(48988604..49170113)
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AA seq
1147 aa
AA seq
DB search
MKKFNPIRKVLDGLTAVSSSSSSSSSSCQPGNKELEITETLQSEHFQLCKTVRHGFPYQP
SALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALTDD
TLHLWNLRQKRPAVLHSLKFSRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYV
IMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGIVVLWDLKSKKADYRYTYDEAI
HSVAWHHEGKQFICSHSDGTLTIWNVRSPAKCIQTIVPHGKQIKDGKKPEPCKPILKVEY
KTTRYGDPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQ
EPYAVVVLLEKDLVVIDLAQNGYPIFENPYPLSIHESPVTCCEYFADCPVDLIPALYSVG
ARQKRQGYSKKEWPISGGNWGVGTQSYPEIIITGHADGSIKFWDASAITLQVLYKLKTAK
VFEKSRNKDDKPSTDIVDEDPYAIQMISWCPESRVLCVAGVSAHVIIYRFSKQEVTTEVV
SMLEVRLLYEINDLESPDIEQVPTPSGGPNSQPIVFQSHPSTSSSSSDGIRDNVPCLRVK
STALKQSAGYQVELVIQLVWVSGEPPQQITSLAVNSAYGLVVFGNCNGIAIVDYIQKAVL
LNLSTVELYGSNDPYQRQPRSPRKTRQPSGAGLSDINESTVASEDRCKSPTSGCTSNSSD
DEQTKSKFIEKVKIKGRRFSKAIVTDLAKMSRKLSLPTELKPELDVRDNSFSRSRSSSVT
SIDKESREAISSLHFCETFTRKPDVSTSPCLWVGTTLGTVLVIVLNLPPGGEQRLLQPVI
VSPSGTILRLKGAILRMSFLDTLGALIPPASESWREPNVPEDKDDKDRLKKRRPVSVSPS
SSQEISENQYAVICSEKQAKVISLPSQNCIYKLNITETSFVLRGDIVSMSNSTCLACFCA
NGHIMTFSLPSLRPLLDVNYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRITYSQETCE
NLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREDLFGETASGKPSRSLAQHIPGP
GGIEGVKGAASGVVGELARARWALDERGQKIGELEEKTTAMLASADSFSKHAHEMMLKYK
DKKWYQF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaaccccatcaggaaggtgctggacggcctgacagccgtttcctcctcc
tcttcttcatcttcttcttcatgccagcccgggaacaaggagctggagattacagagacc
ctccagtccgagcacttccagctctgcaagacagtccgccatggattcccttatcagccc
tcagccttggcatttgatccagtgcagaagattcttgcaattgggacccagaccggtgct
ctaaggctattcggtcgaccaggagttgaatgctattgtcagcatgacagtggagctgca
gtaatacaacttcagttcctgattaatgagggagctctagtgagtgccttgacggatgac
actttacatttatggaacctgcgacagaagagacctgctgtactgcattccctaaaattt
agtagagaaaggataacattttgccacctgcctttccagagcaaatggctctacgtggga
acagaaagaggcaatattcatattgtcaacgtggagtcattcactctctcaggctacgtc
atcatgtggaataaagccattgaactgtcatccaaatcacacccaggaccagttgtccac
atcagtgataatccaatggatgaagggaagctcctgattggttttgagtctggtatagta
gtgttatgggacctcaagtcaaagaaagcagactacagatacacctatgatgaggctatt
cattctgttgcttggcaccatgaaggaaagcagtttatctgcagccattcagatggaact
ttaaccatatggaacgtacgctctcctgccaagtgcatacagacaatcgtgccgcatggt
aaacagattaaagatggaaaaaagccagaaccctgcaagcctatcctgaaagttgaatat
aaaacaacacgatacggggatccttttatcatcctttcaggcggcttatcatacgatact
gttggaagaaggccttgcttaactgtaatgcatgggaaaagcactgcagtcctggaaatg
gattatcctattgtggatttcctaaccctttgtgaaactccctatccaaatgatttccag
gaaccatatgctgttgttgtactcctagaaaaagatttagttgttatagatcttgcacaa
aatggatatcctatatttgaaaacccttatcctctcagtatacacgagtctcctgtcaca
tgctgcgagtactttgctgattgccctgtggaccttatccctgcactttactcagttggg
gccaggcaaaagcgacaaggttacagtaaaaaggaatggcccatcagtggtggtaactgg
ggtgttggcacgcaaagctatcctgaaataattatcactggccatgcagatggttcaatc
aaattttgggatgcttcagcaataacgctgcaggttttgtacaagttgaagacagcgaag
gtttttgagaagtctagaaacaaagatgacaagccaagcacagacattgtagatgaagac
ccatatgccatccagatgatctcctggtgcccagagagcagggtgctttgtgtggctgga
gtttcagcgcatgtcatcatttacagattcagcaaacaggaagttacaacagaggttgtc
tcgatgctggaagtccggttactctatgaaattaacgatttagagtcccctgatatagaa
caagtgccaacacctagtggaggacccaactcccaacctattgtttttcaatcacatcca
tccacaagcagcagttcttctgatgggattcgagacaatgttccctgtttaagggtgaaa
agcaccgctttaaagcaatctgctggttatcaagtagaattagtcatacagcttgtgtgg
gtcagtggggaacctccacagcaaataaccagtctggctgttaactctgcctatgggcta
gttgtttttggcaactgcaatggtattgctattgttgactacatacagaaggctgttctc
ttgaacctcagcactgttgaattatatggctcaaatgatccctatcagagacagccacga
tctccacgcaaaacacgacaaccctcaggagcgggcctttctgacattaatgaaagcacg
gtggcatcagaggatcgctgtaaatcccctacttcaggttgcacatccaattcttctgat
gatgaacaaacaaagagtaaatttatagaaaaggtgaaaatcaaaggcagaaggttttcc
aaagcgatagtcactgatctagcaaagatgtcaagaaagctaagcctacctacagaatta
aagcctgaattagatgttagagacaattccttcagtcgatccaggagctccagtgtgaca
agcatcgacaaggaatcgcgggaagcaatatcatctctgcacttttgtgagacgttcacc
agaaaacctgacgtgtcaacatccccatgtttatgggttggaacaacgctgggaactgtg
ttagtcattgtactaaacctaccaccagggggagagcagagacttctacagccagtaatt
gtatctccaagcgggaccatactgaggttaaagggtgcaatcttacgaatgtcatttctt
gacacacttggagctttaattccaccagcatctgaatcctggagggaaccaaacgtcccc
gaagataaggatgataaggatcgattgaaaaaacggaggccagtgtctgtctcaccctcc
tcctctcaggaaatcagtgaaaaccaatatgcagtgatatgttctgaaaagcaagcaaag
gtgatctctttgccctcccagaactgcatttataaactcaacataacagagacttctttt
gttctacgaggagatatagtgtcaatgagtaatagcacctgccttgcatgtttctgtgcc
aatggacatattatgacttttagtttgccaagtttaaggccgctgttggatgtaaattac
ttgccacttaccaacatgcggatagcccgaacattctgcttcacaaacaatggacaggca
ttgtatctcgtctcacccacagaaatacagagaattacctatagtcaagaaacctgcgag
aacttacaggaaatgttaggagagctcttcacaccagtggaaacaccagaagctcctaac
agagggttcttcaaaggcttatttggtggaggggcacagtcacttgaccgcgaggatctt
tttggagagactgcatctgggaaaccctcaagaagccttgcccagcacatccctgggcct
gggggaattgagggagttaagggagctgcatcaggagttgttggagaactagctcgtgcc
cgatgggccttggatgaaagagggcagaaaataggggagctggaggaaaaaacaactgct
atgcttgccagtgcagactccttctcaaaacatgctcatgagatgatgttaaagtataaa
gataagaagtggtatcagttctga
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