Xenopus tropicalis (tropical clawed frog): 100488521
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Entry
100488521 CDS
T01011
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04517
IgSF CAM signaling
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100488521 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100488521 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100488521 (sptbn4)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100488521 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
100488521 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_17
Helical_needle
Motif
Other DBs
NCBI-GeneID:
100488521
NCBI-ProteinID:
XP_002938861
Xenbase:
XB-GENE-1013360
UniProt:
F7AN80
LinkDB
All DBs
Position
8:complement(78103509..78176649)
Genome browser
AA seq
2545 aa
AA seq
DB search
MANVSPELDNMEVQTPPNNNNRWEQKEHPWDEPAATGKLFECSRIKALADERDAVQKKTF
TKWINSHLSKVPLRVNDLYTDLRDGYIITKLLEVLSGEQLPKPTRGRMRIHYLENVDKAL
QFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIRIETEDSRETRSAKDALL
LWCQMKTSGYPEVNIQNFTTSWRDGLAFSALIHRHRPDVIDFNKLTKSNATYNLQHAFNT
AEQQLGLTKLLDPEDVNMEHPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDKAIET
EKDIVKYEVLASELLEWIERTIAIITNQKFANSLLGVQQQLQVFTTYCTTEKPCKFQEKG
NLEVLLFSIQSKMREEKCKLYVPSEGKNISDINKAWACLEKAEHEREVALRNELIRQEKL
ELLSQRFDQKAAMREAWLSENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIQV
VADLAQELEAEGYYDICRISAQKDNILRQWNLLKDMLSSRRARLEQNLSLQKIFQEMVYM
IDWMDEMQVPLSSKDFGKHLLEVEDLLQKHCLLEADIAAQTERVNSLNQAALKFTQMTDY
QPCDPQVICNRVEHVRSCLEGLRQLAEKRRGELEESRRLWCFLQEVEEAEGWIREKEQIL
SAPQSYGKDLSSVLRLLSKHKILVGELRGRHAMLQQTLQKGEQVLAKRRKGMSGLRQRME
QVRLKWENLQKACDNHQQKLQEASSFYQFSADTMELAGWLQDTYRLVSSDDFGHDEYSTQ
SLVKKHRAETVEIEKHKVAVLGLRQQLSELGAEYRDQVDVQITIVEVEQLYGEVVEVSAL
RSQWLQDALDVYKMFGEVNSCEVWIDEKEQWLMKMEIPQRLEEVEVVQHRFESLDQEMNS
LMGRVLDVNQIVQQLLEGGHPSSSEVRACQDHLNSRWNRIVELVEQRKEQLSSVLRLQNY
FLECNEVKSQIREKRRTMETPQCGSGELGGVLSLQRKLSSMEAALLALEPKLVQLQQDAE
ILATSHPSQAMEVLVHFEEISGEWDALKRTLQGCEDSLTVANKLQQFIQDLDNFLTWLVK
TQTAVAAEELPSNLAEAERLLGLHGSLKEEISRYEEEYNKIQAVNDLLSLEEADLPYLSL
QQWLQKLEVGWNKLLQMWENRREVLVQAHIFHLFLRDFKQAEACLNTQESTLAHVELPNT
VEGVEAAIKKHKDFVTTMELNVQKVSVAVEAGESLIRLGNVFADHVQERISAIQKRSQRN
TALAQKWLQRLRDHLQLQHFLQNCNELDAWVHEKTLMARDSSRDLSQKPHKKWLKHQAFM
AELSQNKGWLEKIEKEGQQLIQEKPELAGVVKKKLEEIRQCWVELESSTQAKAQQLFQAT
KADQVVQNYSELGKRLYHLKEQLQPVDPVPDVSSVNTQLKRLETMESQMEEWYKEVGELQ
AQIASLPLEVASQKALEEKQNEVGTTIVRLIEPLKERRRILLASKEVHQVTRDLEDEIFW
VQERLPLATSKEHGSNLQIVQQLIKKNQNLRREIQVHSPRVDDILERAGAIASIRTPEAE
GVRLGYESLGEMWNMLRDETERRQQLLDITYQVQQYYFDVGEVETWLSEQELLMMNDEKG
KDEQSTLQLLKKHLMLEQTIENYEETIAQLSRQCRTLLDLGHPDSEQISKRQSQIDRLYV
SLKDLVDERKGRLEQQYWLFQLSREVDELEQWIAEKEVVAGSPELGQDYEHVTLLQEKFT
EFATETGSVGQERISAVNQMVDELIDFGHSDAAIIAEWKDGVNEAWADLLELMETRSQML
AASHELYKFFNDCKEVLSQVEEKKQRLPEVKAQEAKLSAGSLQRILSSFEHDIQVLVTQV
RQLQENAAQLRTVYAGENAAAIVTSEQEVMRAWKELLTSCEDCRLQITSTTDRIKFLNLV
RDLISWMESITCQIGAEEKPRDVSSVEVLMSYHQGLKSEIESRNKRIADCVELGKTLVLN
KRPSSDEIKQSLDRLMAKKKEMLEKWNKHWEWLQQMLEVHQFAQEAGVADAWLTAQEPIV
KSPELGNSVDEVEQLIRRHEAFRKTAAVWEERFSSLRRLTTLEKLKAEQSKQPATPLLGR
KVFPDTTDYSARPSPLSRQTVYENSETKLDQKEALSIPDGGQQEIRRARAEKGETRVGYV
RQDIKPERLQPKMDHVETKVADKPLAAQEVERAEKTEIKFAQGMANLTVEKPEIKGSRHT
ERKRDRHERRLERQESSEQETPKQEPPERRRDRHEKRLERQGSSEQETPKQEQSERRRDR
HERRTERQDTIEQDKPRTEPEKQAGKATLADIVEQLQEKEAFQNSSGGQDSPARVPNGVD
KLPERTTRPDRPRARDRPKPRRRPRPKDPNQPPGEARRSRSAPAQSSAPPPPPPTHTIQQ
EGYLFRKHELDGPSKKASNRSWINLYCVLNKGDLGVYKDAKSQSSGATHGGEPLLNLLGA
SCEVASEYKKKKFVFKLRSTDGREFLFQAKDEEEMKNWITAITTCVSQHAEIARWSQSLL
TTSSTDEGNIKRETERRPSGGGRKK
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgttagtccagagcttgataatatggaagtgcaaacacccccaaataataat
aatcgatgggaacaaaaagaacatccatgggatgagccggcagcaacagggaaactgttt
gagtgttcacgaattaaagctctggcagatgagcgtgatgctgtccagaaaaagactttt
actaagtggataaattctcatctttccaaagtgccattgcgtgttaatgacttgtacact
gacctccgagatgggtacatcatcaccaaactgcttgaggtgctatctggggagcagctg
cctaaacccactagaggtcgtatgcgcatacattatctagagaatgtggacaaggcactg
cagttcctaaaggagcaacgcgtgcacctggagaatgttggatctcatgatattgttgat
ggaaatcaccgcttaactctaggtcttatatggactattatccttcgctttcagattcag
gttataaggattgaaacagaggacagccgcgagacaagatcagcaaaggatgcccttctc
ctttggtgccaaatgaagacatctggatatccagaagtcaatatccagaactttacaact
agctggagagatgggcttgcttttagtgctctgattcacagacacagaccagatgttata
gactttaacaaactgaccaaatcaaatgccacatacaatcttcagcatgcatttaataca
gctgaacagcaactgggccttaccaaacttttggaccctgaagatgtcaatatggagcat
ccagatgaaaaatcaatcatcacctatgtggtatctttttatcactacttctccaagatg
aaggccctagctgtagaaggcaagcggattggcaaggtacttgacaaggctattgagact
gagaaagatattgtgaagtacgaggttttggcatctgagctcttggaatggattgagagg
accatagccataatcaccaaccagaaatttgctaactcactgctgggtgttcagcagcaa
ctccaggtcttcactacctactgtaccactgagaagccctgcaagttccaggagaaagga
aatttggaggttttactatttagcattcagagcaagatgagggaagagaaatgtaagctt
tatgtcccaagtgaaggcaaaaacatttctgacatcaacaaggcttgggcatgtctggag
aaggcagaacatgagcgggaagtggctttgcgtaatgaactcatccgtcaggagaagttg
gagctgctttcccaacgctttgatcagaaggctgccatgagggaggcatggctaagtgag
aaccagcgccttgtttcccaggataactttggttatgatctccctgctgtggaggctgca
atgaagaaacatgaggcaattgaagctgacatttcctcctatgaagaaagaatacaggta
gtggctgatctggctcaagagttggaggcggagggatattatgatatctgcaggatttct
gcccaaaaggacaacatattacgtcagtggaaccttcttaaggacatgctgagctcccga
agggcgaggctggagcagaacttgtccttgcagaaaatattccaggaaatggtctatatg
atcgactggatggatgaaatgcaggtccctttatcttccaaagactttggaaaacatttg
ttggaagtggaagacctgctgcagaaacactgtttactggaggctgatattgctgctcaa
actgagagggttaattctctgaaccaagctgccctaaagttcactcagatgactgactac
cagccctgcgaccctcaagtaatctgcaaccgtgtggaacatgttaggagttgcttagag
ggtctgcgccagctagctgagaagcgtcgtggggaattggaggagtcacgccgcctctgg
tgttttctgcaggaagtggaggaggctgaaggctggattcgtgaaaaagaacaaatcttg
tctgcaccacagagctatggaaaggatctaagtagtgttcttcgtctcctcagtaaacat
aagatcttggtaggggaactaagaggcaggcatgccatgttacaacagaccctccagaag
ggagagcaggtgcttgccaagagacgaaaaggcatgtctgggcttcgtcagcgaatggag
caggtgagacttaagtgggaaaacctacagaaggcctgtgataatcatcagcaaaagctt
caggaagcctccagcttctaccagttcagtgctgacacaatggagctagcaggttggctg
caggatacttaccgcttagtctccagtgatgactttggtcatgatgagtattcaacccaa
tccttggtaaagaaacacagagcagaaactgtggaaatagagaaacacaaagttgctgtg
ttgggtctgagacaacaactgtcagaactgggtgcagagtacagggatcaagttgatgtg
cagattactattgtggaggtggagcagctctatggagaagtggtggaagtgtctgccctc
aggagccaatggcttcaagatgccttggatgtttataaaatgtttggtgaggtaaactcc
tgtgaggtctggattgatgagaaggaacagtggttgatgaagatggaaattcctcagcga
cttgaggaggtggaagttgttcagcacaggtttgagagcctggaccaggaaatgaacagc
ctaatggggcgtgtgttggatgttaatcagattgtacagcagcttcttgagggtggtcac
cccagttcttctgaggttcgtgcttgccaggaccacctaaacagcaggtggaatagaatt
gtggagttggtggaacaaaggaaagaacaattgagctctgttctccgtctgcagaattat
ttcctggagtgtaatgaagtgaaatcccagattcgggaaaaaagaagaactatggagact
ccacagtgtggaagtggtgagctaggcggcgtattgtcccttcagaggaaactttcgagt
atggaggccgctttgttggctctggaacctaaacttgttcagcttcagcaagatgccgaa
attcttgccaccagtcatccttctcaagcaatggaggtacttgtgcattttgaggaaatc
agtggagaatgggatgccttaaagaggaccctccaaggatgtgaggactcccttacagtt
gccaacaagctccaacagttcattcaggacttagacaacttcctgacctggttagttaaa
acacagactgctgtggctgctgaagaacttccatcaaatttagcagaagctgagagacta
ctaggacttcatggctcccttaaagaagagatcagtcggtatgaggaagaatacaacaaa
attcaggcagtcaatgatcttttaagcctggaagaggcagaccttccatatctatcactg
cagcaatggctacagaagctggaggtgggatggaacaagctgctgcagatgtgggagaac
cgaagggaggttcttgtgcaggcacacattttccatctttttctaagagattttaaacaa
gctgaagcctgtctaaacacccaggaatccacattggctcatgttgagttgccaaacaca
gttgaaggagtggaagcagctataaagaaacacaaagattttgtaactactatggagctg
aatgtgcagaaagtttcagtagccgtggaggctggagagagcctcataagactcgggaac
gtatttgccgatcatgttcaggaacggatcagtgctatccaaaagaggagccagcgtaat
acggcactcgctcaaaaatggctccagagactgagagaccatctacagctgcagcacttt
ctccaaaactgcaatgagctggatgcctgggttcatgagaaaacgctgatggctcgagat
agctcacgggacctgtctcagaaaccccataagaaatggctaaagcaccaggcattcatg
gctgagctctcgcagaataaaggttggcttgagaagatagaaaaggaaggtcaacagcta
atccaggaaaaaccagaattggctggagtggtgaaaaagaagcttgaggagattcgacaa
tgttgggttgaactggagtcaagtacccaggccaaggcccagcaactctttcaagccaca
aaggcagaccaggtggtgcagaactactcggaactcggcaaaaggttataccatttaaag
gaacagttacagcccgtggatccagtacctgatgtttccagtgtaaacactcaactcaaa
aggcttgagacaatggagtctcagatggaagagtggtacaaagaagttggagaactgcaa
gcacagattgcctctcttcctctggaagtggcaagtcaaaaggcactggaagagaagcaa
aatgaggtgggaacaacaattgtgcgcctgattgagccactgaaggagaggagaaggatt
cttttggcttctaaagaggtgcatcaggttacccgagacctggaggatgaaattttctgg
gtgcaagagcgactgcctcttgctacttccaaggaacatgggagcaatcttcaaattgtg
cagcaactcatcaagaaaaaccagaacctgcgacgggagattcaggtgcattcccctcgg
gtagatgatattctagaaagggcaggggctattgccagcatccgaactccagaggcagag
ggagtgcggcttgggtatgagagcctcggggagatgtggaatatgctacgagatgagact
gaaagaagacagcagctactcgacattacctaccaggtgcagcagtattattttgatgta
ggagaagtggagacctggctgagtgagcaggaacttcttatgatgaatgatgagaagggg
aaggatgaacagagcactctgcaactcctgaagaaacaccttatgctggaacagactatt
gagaattatgaggagacaatagctcagctctctaggcagtgccgcacccttctggaccta
ggacacccagacagcgagcagataagtaagcgtcagtctcagattgatcggctctacgtg
tctctgaaggacttggtagatgagcggaagggacgcctggagcagcagtattggctcttc
cagttaagtcgtgaggtggatgagctagagcagtggatagcagaaaaagaagttgtggct
ggatctccagagcttggacaagactatgagcatgtgacacttcttcaggagaaattcaca
gagtttgccactgaaacaggcagtgtaggacaagaacgcatctctgcggtgaatcaaatg
gtggatgagctaattgactttgggcattcagatgcagccattattgcagagtggaaagat
ggtgtcaatgaggcttgggctgatttgctggaattgatggagaccagatcacagatgttg
gctgcttctcatgagctgtataagtttttcaatgactgcaaagaagtattaagtcaagtt
gaggagaaaaagcagaggttgccagaagtgaaggctcaagaagccaagctatcggcaggg
tccttgcaaaggatactcagctcttttgaacatgatattcaagttcttgtaactcaggta
cgtcagctgcaggagaatgcagcccaactgcgcactgtttatgctggtgaaaatgccgct
gcaattgtgactagtgagcaggaagtcatgcgagcatggaaagagctgctgacatcttgt
gaggactgcagactgcaaataactagtaccactgatcgaattaagttcctcaatcttgtg
agagacctgatttcctggatggaaagcattacgtgccagattggcgcagaagaaaagccc
agagatgtgtcatctgtggaagtcttaatgagttaccatcaagggctaaagagtgagatt
gagtcacggaacaagaggattgcagattgtgtggagctaggcaagaccctggtcctgaac
aaaagaccatcttcagatgagataaagcagagtttggacaggttaatggcaaagaaaaag
gaaatgttggaaaaatggaacaaacactgggagtggcttcaacaaatgttggaggttcac
cagtttgcccaagaagctggagtggcagatgcctggctgacggctcaagaacctattgtt
aaaagccctgagcttggcaacagtgtagatgaggtggagcagctcatccgaagacatgag
gccttccgcaaaacagccgcagtttgggaggagaggtttagttcattgagacgccttact
acgctagagaaactaaaagcagagcaaagtaagcagcctgcaacacctcttctcggccgc
aaggtttttccagacacaactgattattctgctcgcccttcccctctttcacgtcaaacc
gtctatgagaattctgagacaaaattggatcaaaaagaagctctttccatccctgatggt
ggccaacaggaaattcgaagggcaagagctgaaaagggagagacaagggtaggatatgtt
cgacaggatataaagccagaacgtctacagccaaagatggaccatgtggagaccaaagta
gcagataaaccacttgcagcacaggaggttgaaagggcagagaagactgaaatcaaattt
gcacaaggaatggctaacttgactgtggaaaaaccagaaattaagggaagtcgtcacact
gagaggaagagggacaggcatgaaaggcggttggaacggcaagagtctagtgagcaggaa
accccaaaacaagagcctccggagagacggcgagatcgtcatgagaagcgattagagcgg
cagggatccagtgagcaggaaaccccaaaacaagagcaatctgagaggagaagagacagg
catgagaggagaacagaaagacaggatacaattgaacaggacaagccaaggactgaacct
gagaagcaagcaggaaaagctactttggcagatattgtggagcagctacaagagaaagaa
gctttccagaacagctccggtggccaagattctcctgcccgtgtaccaaatggggtagac
aaacttcctgaaagaacaacaagaccagatcgtccacgagccagagatcgtccaaagcca
aggagaagacctcgacccaaagatcctaaccaacctcctggcgaggcacgaaggtcacgc
tcagccccagcacagagcagtgctccacctccaccacctcccacccacaccattcaacaa
gaaggatacctgttcaggaaacatgagcttgatgggcccagtaaaaaggcttcaaatagg
tcatggataaatctatactgtgtattaaacaaaggagatcttggggtatacaaggatgca
aagagtcagagctcaggggccacacatggtggtgagcccctattaaacctacttggagcc
tcctgtgaggtagctagtgaatacaagaagaagaaatttgtgttcaaactcaggtcaaca
gatggtagagaattcctctttcaagcaaaagatgaggaggagatgaaaaactggattact
gcgataaccacatgtgtctcacaacatgcagagattgcacggtggagccagagtcttctc
actacctcctccaccgatgaaggtaacataaagcgtgagactgagcgcagacccagtggg
ggtggtcggaaaaagtga
DBGET
integrated database retrieval system
