Xenopus tropicalis (tropical clawed frog): 100488540
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Entry
100488540 CDS
T01011
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
xtr04517
IgSF CAM signaling
xtr04530
Tight junction
xtr04810
Regulation of actin cytoskeleton
xtr05100
Bacterial invasion of epithelial cells
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100488540
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100488540
09144 Cellular community - eukaryotes
04530 Tight junction
100488540
09142 Cell motility
04810 Regulation of actin cytoskeleton
100488540
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100488540
05100 Bacterial invasion of epithelial cells
100488540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488540
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100488540
Membrane trafficking [BR:
xtr04131
]
Others
Actin-binding proteins
Arp2/3 complex
100488540
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
100488540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Rax2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
100488540
NCBI-ProteinID:
XP_002943496
UniProt:
A0A803K5W4
LinkDB
All DBs
Position
10:50540826..50551733
Genome browser
AA seq
357 aa
AA seq
DB search
MSLYSFGTDPISCHAWNQDRTQVAISPNNNLVQIYQRSDNEWKKIHELTEHNGRVTGIDW
APTSNRLVTCAADRNAYVWSLRDGAWKPTLVLLRINRAATCVKWSPRENKLAVGSGSKII
SVCYFEKENDWWLSKHIKKSIGSTILSLAWHPNNVLLAAGSSDFQCRVFSGYVKEIDDKP
SPTHWGTKIPFGELLFQSGEKGGWVHGVAFSPSGRYLAWVDHNSCVSVADSAEDKAVTRL
STEYLPFLSLLFVNECQLLAAGHDCAPYLFSYGGSGKLDFEAKIDVQKETTKTALSAMSH
FRNLDKKGAKESERSDVTTLHQNSISQLSIVDGDPSDVTAFSSTGIDGALVIWSLKA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtacagtttcgggacagatccaatatcctgtcacgcgtggaaccaggaccga
acccaagtcgccatcagtcccaataacaacctggtgcagatttaccagagatccgacaac
gagtggaagaagatccacgaactgacagaacataacggaagggtcacaggtatcgactgg
gcccccacttccaaccgccttgtcacctgtgcggccgacagaaacgcctacgtctggtcg
ctacgggacggcgcctggaaaccaaccctcgtccttctgcgcatcaaccgcgccgccacc
tgcgtgaaatggtcgccccgcgagaacaagctcgccgtgggcagcggctccaagatcatc
tccgtctgctacttcgagaaggaaaatgattggtggctgagcaaacacatcaagaaatcc
attggctccaccatcctcagcctggcctggcaccccaataatgtcctgctggccgcgggg
agcagtgacttccagtgccgggtattttcggggtacgtgaaggaaatcgacgacaagccg
agcccgacacattgggggaccaagatacctttcggggagctgttgttccagagtggggag
aaggggggatgggtacacggagtggccttctcgcccagcggtcggtacctggcctgggtc
gaccataacagctgcgtcagtgtcgccgattcggccgaagacaaagcggtgacgcggctg
agtaccgagtatctgcccttcctgtcgctgctctttgtgaacgagtgccagctcctcgcc
gcagggcatgactgcgctccctatctcttctcatacggcggctcggggaagttggacttc
gaggccaagattgacgttcagaaagagaccaccaagaccgccctctccgcgatgagccac
ttccgtaacctggacaagaagggggcgaaggagagtgagcgctccgatgtgaccaccctg
caccagaacagcatcagccaactgtccatcgtggatggagacccgtccgacgtaaccgcg
ttcagtagcaccgggatcgacggcgctttggttatctggtcgctcaaggcctga
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