Xenopus tropicalis (tropical clawed frog): 100488564
Help
Entry
100488564 CDS
T01011
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488564
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100488564
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Others
Ferlins
100488564
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100488564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerI
FerA
Pex24p
TBK1_CCD1
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
100488564
NCBI-ProteinID:
XP_031751122
UniProt:
A0A8J1IZU2
LinkDB
All DBs
Position
1:complement(15271995..15476518)
Genome browser
AA seq
2108 aa
AA seq
DB search
MLRCVVQRASNLPNVEKGVRYSDPVTSLTFRGVKKKTKIIKNNLNPIWNEGFEWDLKGLP
LDNSSELVAVVKDHETMGRNRFLGETRVSLRDLLTSPNLTATYNAPLLDSKKQGTGAILT
LQISYFPPPGAAPVVPPPAPKEPTPSLNELDTITDTAGEEDTEDQAGTGDEADIVSLAPG
GAEQPTLPKKTAPVPVQGLKRKKSNSKKHLSNKPQDFQVRVRVIEGRQIPGINIKPVVKV
TVAGQTKRTRIRKGNNPYFDETFFFNFFESPSELFDEPVFLTVLDSRSLRTDSVIGEFRM
DVGMIYGESKHAFLRKWLLLSDPDDFSAGAKGYLKVSLYVLGPGDESPVEKKEVSEDKED
IEGNLLRPAGVSLRGAHLTLKIYRAEDLPQMDDAVLDNVKQIFGFDSNKKNLVDPFVEVS
FAGKMLLSKIMEKNANPQWSQSITLPIRFPSMCEKMRIRLLDWDRLTHNDIIGTTYLSMS
KISAPGGEIEDETPRKALPVSNFDDTLGFLPTFGPCYVNLYGSPREFTGFPDPYEDLNLG
KGEGVAYRGRVLLELETKLVEQAEQKVEDIPSDDISRVEKYLRRRKYCLFAAFYSATMLQ
DVDDAIQFEVSIGNYGNKFDNTCLPLASTTQYSRAVFDGCQYYYLPWGNVKPVVVLSSHW
EDIGHRTDTQNILQYAIDNLAANLDWVHLAVKAKSSPYDLDALVARLFDDIITDCSHALP
DVKSMQGTTHLDQYLYRFRKTNLAQIVQAALKLKHDDCVEQENVMEQAEDWLMRLKAMAE
EPQNSLPDIVIWMLQGEKRVAYYRMPARDVLFSRNGSKCCGKNCGKLQTIFLKFPQEGTQ
GAKMPAQVRVQLWFGLAVDQKEFNHYAQGKLSVFAEAYENQTKLALVGNWGTTGLTYPKY
SDVTGKIKLPKESFKASTGWSWAGDWFISPEKTLLYDTDAGHMSFVEEVFENQARLPGGQ
WIHMTEAYSDVNGEKVLPKDEIECPPGWKWEDDEWSTDTNRAVDEQGWEYGITIPPDRKP
KSWVPAEKMYHTNRRRRWVRLRRRDPKQIEILKKHKPDESESEGWEYASLFGWKFHLKYR
KTDSFRRRRWRRRMEPLERTGAAAVFALEGSLGGITDDKSDDGKNTSTMSFGVNRPTISC
IFDYGNRYHLRCYIYQARNLVPMDQDSFSDPYAIVSFLHQSQKTLVMKSTLNPTWDQTLI
FHEIEVFGDPETIKESPPNIVVEIYDHDTYGADEYMGRCICKPSFERSPRLSWHPVIMGT
KNVGELLAAFELIPREKPAVHLIPGLEGEISGVLSELLIPRFFTEKLLDWSSDADLPYPP
PQREANVYMVPQGIKPVLQRTAIEILAWGLRNLKSYQLASVTSPSLIVECGDELIQSGVI
KNVKKNPNFDVCLLLMEVRLPREDLYCPPIIVKVIDNRQFGRKPVVGQCTIKSLEEFHCD
PNSEDLEVEDGLSDNVSVTPRDEVLIDIDDKEPLIPTQLADGMTSSAIINLSSSRPSLHE
EEFIDWWSKFYASIGEKEKCGTYLEKGFDTLQVLDTELENIEDYEELSDFCRTFKLYRGK
TQDETEDPSVVGEFKGSFKIYPLPDDPSVPRPAPQFRQLPAKGLQECLVRVYIVRAFGLQ
PKDPNGKCDPYVKISIGKKSLNDQEHYIPCTLEPVFGKMFELTCTLPLEKDLKVTLYDYD
MISKDEKIGETVIDLENRFLSKYGARCGLPQSYCISGPNQWRDQRKPSELLRIFAQQRNF
KPPNFKNNSIMFRNHEYHVSELEDSKFPNPHQGPPEERLALHVLRRQGLVCEHVETRALY
SPLQPDIEQGKLQMWVDLFPKSLGSPGPPFNITPRKAKRYYLRCIIWNTKDVILDDVSIT
GEKMSDIYVKSWLIGHEENKQKTDVHYRSMGGEGNFNWRLVFPFDYLPAEQVCSVSRKEH
FWSLDKTENKIPPNLIIQIWDNDKFSFDDYLGSVQLDLNRMPRPAKTAEKCRLDLLDEVE
SANHCSLFEQKTVKGWWPCVGQEGDEKILAGKVEITLEIVNEQEHDERPAGIGRDEPNMN
PRLEDPKRPETSFLWFTSPYKTLKYILWRRYKWLILVFFLLFILLLFLGIFLYSFPNYAA
MKLVKPFS
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgtgtggtccaaagggccagcaacctcccaaatgtggagaaaggggtcagg
tacagtgacccagttaccagtttaaccttcagaggggttaagaagaaaacgaaaatcata
aagaacaatctgaatcccatatggaacgagggattcgagtgggatttaaaaggattgccc
ttggacaacagttcggagcttgtcgcggtagtgaaagaccatgaaaccatgggaaggaac
aggtttctgggtgagacccgagtcagcctacgggatttacttacgtcccctaacctgacg
gccacgtataatgccccactcctggacagcaagaagcagggcacgggggcgatattaacc
ttgcagatatcttactttcctccaccgggggcagccccagttgtaccccctcctgcaccc
aaggagcccaccccatcgctcaatgagttggacaccatcactgatacggctggtgaagag
gacacggaagaccaggctggaactggcgatgaagcggatattgtctctctggcccctgga
ggagcagagcaacccactctccccaagaaaactgcccctgtccctgtgcagggattaaag
agaaagaagagcaactccaaaaaacacctctccaacaagcctcaggacttccaggttcgt
gttcgagtgatagaagggaggcagatcccagggattaacatcaaacctgttgtcaaagtc
acagttgctgggcagaccaagagaacccggatacgcaaagggaacaacccatatttcgat
gagacatttttcttcaatttttttgagtccccttctgaactctttgatgaacccgtgttc
ctgactgttctcgattcccgctccctccgaacagactcagtgattggtgaattccggatg
gacgtcggaatgatttatggagaatcaaaacatgccttcctcaggaagtggcttctcctc
tccgacccagacgatttctccgcgggggccaaggggtacctgaaggtcagcctctatgta
cttgggcctggagatgagagcccggtagagaaaaaggaggtctcggaagacaaggaggac
attgaggggaacttgctgcgaccggccggggtgtccctgcgaggagcccaccttactctg
aagatttacagggcggaagatctgccgcagatggacgatgctgtgctggacaatgtcaaa
cagatctttggctttgacagcaacaagaaaaacttggtggatccctttgtggaagtcagt
tttgcggggaagatgctcctcagtaagatcatggagaagaacgccaacccgcagtggagt
cagtccatcactcttcccatcaggttcccctctatgtgtgaaaaaatgcgcatccgcctg
ttggactgggaccgcctcacccacaacgatatcatcggcaccacctacctgagcatgtcc
aaaatctcagctcctggcggcgagattgaagatgagacaccgcgtaaggccttgccggtt
tctaactttgatgacactttgggatttctgccaaccttcgggccttgctatgtgaacctt
tatggcagccctcgggagttcactgggtttccagacccttatgaagatctgaacttgggg
aagggagaaggagtggcttaccgtggtcgggtccttctggagttggagacaaagctggtg
gagcaggctgagcagaaggtggaagacattccttcagatgatatttcacgggttgagaaa
tatctccgcagacggaagtactgcctctttgccgctttctattcagccaccatgttgcag
gacgtcgatgacgccattcagtttgaggtcagcattggaaattatggaaacaagttcgac
aacacctgcctccccctggcctccaccacgcagtacagccgggctgtgttcgacggttgc
cagtactattatctcccctggggtaacgtaaagcccgttgttgttctctcatctcactgg
gaagacatcggccacagaactgacactcagaatattctacaatacgccatcgataatctg
gcagcgaatctggactgggtccaccttgctgtgaaagctaagagctccccctacgacttg
gacgctttggtcgcgcgtttgtttgatgacatcatcaccgactgcagccacgccctgcca
gatgtcaagtctatgcaagggaccacccacctggaccagtacttgtacagattccgcaag
accaaccttgcccagattgtccaggcggctctgaaactcaagcacgatgactgtgtggag
caggagaatgtgatggagcaggcagaggactggctaatgcgactaaaggctatggctgag
gagccgcagaacagcctgccagacatagtgatttggatgttacaaggggagaagcgtgtg
gcttattatagaatgccggcccgcgatgtccttttctccaggaatggctccaagtgttgc
ggcaagaactgcgggaagctccagacaatatttctcaaatttcctcaggaaggaacccaa
ggagcgaagatgccagctcaggttcgagtccagctgtggtttgggctcgctgtggatcag
aaggaattcaatcattatgctcaggggaaattgtctgtttttgctgaagcttatgaaaac
caaacaaagctggctctcgtgggcaactggggaacaactggccttacgtaccccaaatac
tcagacgtgaccgggaaaatcaaacttccaaaggagagtttcaaggcttccactggatgg
agctgggccggagactggtttatcagcccggagaaaacgttgctgtatgatacggacgcg
ggtcacatgagcttcgtggaagaggttttcgagaaccaggccaggctgcccggtgggcaa
tggatccatatgacggaggcctactcagatgtgaatggggagaaggttttgccaaaagat
gagatcgaatgcccccctggctggaaatgggaggatgatgaatggtccacggacaccaac
agggctgttgatgagcaaggatgggagtacggcattactatcccccctgaccggaagcct
aaatcctgggttccagcagagaagatgtatcacaccaaccgcaggaggcgctgggtcaga
ctaagacgaagggaccccaagcagattgagatcctaaaaaagcacaagccggacgagtcg
gagagcgagggatgggaatacgcctctctctttggctggaagtttcacctgaagtaccgt
aagactgacagtttccgcaggcgcaggtggaggcgccgtatggaacccctggaacgcacc
ggggcggcagctgttttcgctttggaaggttccctgggtggaattacagatgataaaagc
gatgatggaaaaaacacgtccacaatgagcttcggggtcaaccggccgacgatatcctgc
atatttgactatgggaaccgttaccatttgcgctgctacatataccaagcgaggaacctg
gtgcccatggaccaagacagcttttctgatccatacgccatagtctctttcctccatcaa
agtcaaaagaccttggtgatgaagagcaccttgaacccaacatgggaccagacccttatt
tttcatgaaattgaagtttttggagaccctgaaaccataaaagaatcccctcccaacata
gtggtggaaatctatgaccacgatacttacggtgcagatgaatacatgggaaggtgcatt
tgcaagccaagctttgagcgctccccccggttatcttggcacccggtgatcatgggcacg
aagaacgtcggagagctgctcgctgccttcgagctcattcccagggaaaagccggctgtt
catcttatcccaggactggagggagaaatctcaggagttctgagcgagctgcttattcct
cgcttcttcaccgagaaacttcttgactggtcatcagacgccgaccttccctacccacct
ccacagagggaggccaatgtgtacatggtgccccagggaatcaaacccgttctgcagcgc
accgctatagagatcctggcctgggggctgaggaacctaaagagctaccagctggccagc
gtgacctccccgagtctgatagtggagtgcggcgatgaactgatccagtcgggggtcatt
aagaacgtcaagaagaaccccaactttgatgtgtgcctgctcctcatggaagtgaggttg
cccagagaagatctatattgtccacccatcattgtgaaggtcatcgataaccgtcagttt
ggaagaaaaccagtcgtcggccaatgcaccatcaagtctttggaagagttccattgtgac
cccaactcagaagatctagaggtagaagatggactgtcagacaatgtgagtgttacaccc
agggacgaggtgcttattgacattgatgataaggaacctcttatcccgactcagcttgcc
gacggtatgaccagctcagccattattaacttatcatcttctcggcccagtctccatgaa
gaagagttcattgattggtggagtaagttttatgcttccattggggaaaaagagaaatgt
ggaacatacctagagaaaggctttgataccttgcaggtactggacacagagctagagaac
atagaggattacgaagaactctcagacttttgccgaaccttcaaactgtacagaggaaaa
acacaagatgagacagaagatccctctgtggttggagaatttaagggatcctttaaaatc
tatcctcttcctgatgacccatcagtccccaggccagcaccccagttccgccaactccct
gccaaaggtcttcaagagtgcctcgtgcgtgtctatattgttcgtgcttttggtttgcag
ccgaaagaccccaacggcaagtgtgatccctacgtgaagatttccattggaaagaagtca
ttaaatgatcaggaacattatatcccttgcaccttggagcctgtttttggaaaaatgttt
gagctgacctgcaccctccctctggagaaagacctgaaggtcacactctatgattatgac
atgatttcaaaagatgagaagattggagagacggtgatagacctggagaaccgtttcctc
tcgaaatatggagcaagatgtggattgcctcaatcctactgcatatctgggccaaaccag
tggcgggaccaacggaaaccatcggaacttctcagaatctttgcgcagcagcggaacttc
aaaccccctaacttcaaaaacaacagcataatgttccggaaccatgagtaccatgtctct
gagctggaagacagcaagttccctaacccgcaccagggcccgccggaggaacggctcgct
ctacacgtactgagaaggcaaggcctggtgtgtgagcatgtggagaccagggccctgtac
agccctttgcagccggatatagaacagggaaagctgcagatgtgggttgacttgttcccc
aagtccctcggttctcccggccctccctttaatataaccccacggaaagccaaacggtat
tacttgcgctgtatcatctggaacaccaaagatgtgattctggatgatgtgagcatcaca
ggagagaagatgagtgatatctatgtcaagagctggctgattggccatgaagaaaataaa
cagaagacagatgttcactacaggtctatgggaggtgaagggaattttaactggcggctt
gtgttccctttcgactatcttcccgcggagcaggtctgctcagtgtccagaaaggagcat
ttctggagcctcgacaagactgagaataaaatccctccaaacctcattatacagatatgg
gacaacgataagttctccttcgatgactatttaggttccgtgcagctggacctcaaccgg
atgccacgacctgccaaaacggcggagaagtgcaggctggacctgctggatgaggtggag
tctgcaaatcactgctccttgtttgagcagaagacagtcaagggatggtggccgtgtgta
gggcaggagggggacgagaagattctggctggaaaagtggaaattactttagagattgta
aatgaacaggaacatgatgagagaccggccgggattggtcgagatgagccaaatatgaac
ccaagacttgaagacccaaagcgcccagaaacctcgttcctctggttcacttccccgtac
aagaccctgaagtacatcctgtggaggagatacaagtggctcatccttgtcttcttcctt
ctattcatcctactgctcttcctcggaatcttcctgtattccttcccgaactacgctgct
atgaagctggtgaagccgttcagttga
DBGET
integrated database retrieval system
