Xenopus tropicalis (tropical clawed frog): 100488732
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Entry
100488732 CDS
T01011
Symbol
pacs2
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2 isoform X4
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488732 (pacs2)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
100488732 (pacs2)
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Gene cluster
GFIT
Motif
Pfam:
Pacs-1
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
100488732
NCBI-ProteinID:
XP_002939593
Xenbase:
XB-GENE-5903639
UniProt:
A0A8J0QVY5
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Position
8:complement(115785013..115860294)
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AA seq
878 aa
AA seq
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MADKGRLSFPGALNRPVPMNLFATWEIDGSSPSCIPRLCSLTLKKLLVVRELDKEHISVV
IAVKMQGSKRILRSHEIVLPPGGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKN
RTILGYKTLAVGSINMAEVMQHPTEGSQVLSLFSNMKEASAKVAEIWIFSLSSQPIDHED
STMHTSQKIKSTDNYSEEEYESFSSEQEASDDAVQGQDLDDDEFDVGKPKKQRRTIVRTT
SITRQQNFKQKVVALLRRFKVSDEVLDSEQDPGEHVPEVEEDMDLLYDTLDIENPSDSGP
EMEDDDSVLSTPKPKLKPYFEGLSHSSSQTEIGSLHSARSQRELPSPVEVPERRTSGPKP
QSDCVSDTVSLEAAQQEAQDAELSTLDVFIERLPPSGKITKTESLIIPSTRLEGKQAGRR
GRSTSLKERQPARPQNERANSLDNERSPDTRNHLQIPRKTVYDQLNHILISDDHLPENII
LINTSDWQGQLLSDILQKHDLPLVGTCSPADIQAAFNTIVSRIQRYCNCNSQPPNPVKVA
VAGAQNYLSAVLRMFVEQLSHKTPDWLGYLRFLIIPLGSHPVAKYLGSVDYKYNNLFQDP
AWRDLFSKLDAQTTVQDPPDVASRVTQYISGANCAHQLPIAEAMLTYKQKSPDEDSSQKF
IPFVGVVKVGIVEQSSATSGDSDDAAPSGSTVLSSTPPSISPAVKEASPTPPSSPSVTSG
FSSSPSQSPGGELMGLQLDYWIAAPFAEKKKDLEKKDSTSAKNTLKCTFRSLQVSRLPSN
SDVPSAPTMSMTVVMKEKNKKVMFLPKKTKDKEVESKSQCIEGISRLICTAKHQQNMLRV
LIDGVEWNDVKFFQLAAQWSSHVKHFPICIFGHSKANF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagggcaggctgagcttcccgggggcactgaacaggccagtgcctatgaac
ctctttgctacctgggaaatagacggttccagccccagctgcatccccaggctctgcagt
ctaactctgaagaagcttctggtggtcagggagctggacaaggagcatatttcagtggtc
attgcagtgaagatgcagggatccaaacgcatcctgcgttctcatgagattgttctgccc
cctggtggacaagtggagacagacctggcacttacattttcattgcagtaccctcacttt
ctgaaaagggaaggaaataaactacagattatgcttcagaggcggaaaagatacaaaaac
cgaacgattctaggttacaagactctagctgtcggcagcattaacatggctgaggtcatg
cagcatccgacggaaggaagccaagtcttgagcctgtttagtaacatgaaggaggcatcg
gccaaagtagcagagatatggatattttcactctccagtcaaccgattgaccacgaagac
agcaccatgcacaccagccaaaaaatcaagtccacagataactattctgaggaagagtat
gaaagtttctcctcggagcaagaagccagtgatgatgctgtgcaaggacaggatttagat
gacgatgaattcgatgttgggaaaccaaagaagcagcgaagaacgatagtaagaacgacg
tcaataaccaggcaacagaacttcaagcagaaggtggtggcgttgttacggaggtttaaa
gtttccgacgaggtgctcgactctgagcaggacccaggcgagcatgtgccggaggttgaa
gaggacatggacttattgtatgatacacttgatattgagaaccccagtgacagtggccca
gagatggaagatgatgacagtgtccttagcacgcccaagccaaagctaaaaccttacttc
gagggcctgtcccactccagctctcagacagagatcggcagcttacacagtgcaagaagc
cagagggaattacccagtccggtggaagtccctgagagacggacatcgggacccaagcct
cagtctgattgtgtctcagatacagtgtcgctggaggctgctcagcaagaagcccaggat
gcagagctgtccacactggatgtcttcattgagaggttaccacctagtggcaagattacc
aaaacggaatccttaataatcccttcaaccaggttagaagggaaacaggcaggacgccgg
ggccgaagtacatctctgaaggaaaggcagccggcaaggcctcagaacgaacgggccaac
agtcttgataatgagcgctcccccgacacaaggaaccatctacagatacccaggaaaaca
gtctacgatcagttaaaccacatcctgatttcagatgaccatctacctgaaaatattatt
ctcatcaacacgtctgattggcagggccagcttctttccgacatcttgcaaaagcacgac
cttcccttagtaggcacgtgttcccccgctgacatccaggcagccttcaatacaatagtg
tccaggatacagcgatattgcaactgcaattctcagcccccaaaccctgtgaaagtggcg
gtggcaggagctcagaattacctcagtgccgtgctgagaatgtttgtagagcagctgtca
cacaagactccagactggctgggctacctgaggttcctcatcatcccactaggatctcac
ccggttgccaagtatctgggatcagtagattacaagtacaacaacctctttcaggatcca
gcatggagggatctcttctctaaactggatgcacaaacaacggtgcaagaccctccagat
gtggcgtcccgcgtcacgcagtatatctccggagccaactgtgcccaccagctgcccatt
gcagaggccatgctcacttacaagcagaaaagccctgacgaagactcctcacagaagttc
ataccttttgttggggtggtaaaagttggtattgttgagcagtcctcagcaacctcaggg
gattcagacgatgctgcgccgtcaggttccactgtactctcatccactccgccctccatt
tctcccgctgtgaaagaagcatctcccactcccccctcctctccatctgttacgtctggg
ttctcctcttcgccaagccaaagcccaggaggggaactcatggggctccaactggattac
tggattgccgcccctttcgcagagaagaagaaagacttggagaagaaggactccacctcc
gccaagaacactttgaaatgcactttccgctcgctgcaggtcagcaggcttcccagcaac
agtgacgtcccctctgctcccacaatgtccatgaccgttgtcatgaaggaaaaaaacaaa
aaagtcatgtttttgccgaagaagacaaaggataaagaagtggaatctaagagccaatgt
atcgaaggcatcagtagactcatttgcactgcaaaacaccaacagaacatgctcagagtg
ctgatcgatggagtggaatggaacgacgtcaagtttttccagttggctgcacagtggtcc
tctcacgtcaagcactttcccatatgtatattcggacactctaaagccaacttctag
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