Xenopus tropicalis (tropical clawed frog): 100488737
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Entry
100488737 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF22-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100488737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100488737
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100488737
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_11
C2CH-3rd_BIRD-IDD
KRAB
Motif
Other DBs
NCBI-GeneID:
100488737
NCBI-ProteinID:
XP_031748853
UniProt:
A0A8J1ITD7
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Position
9:complement(3439618..3457298)
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AA seq
840 aa
AA seq
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MGMWEEASDPVMGKKDKNEERKERILNLTLEIIYLLTGEGYVIPKKKSPTVGLGALHAPG
SVIQKENDKKILELISNIIQLLTGEVAIRCEDVSIYFSLEEWEYIKGNKALYREGIKEEE
EEPQQLRPLACEYKDGSDVTAHTEATLCCNNDGNLTNPDVSPAEQLPPANGIKEEPASWE
GGNQSDCSINPLTEQIQGTDTPTPIMGSSLNNSSAEDYISHTIKEEACLCEGRKHSDCSI
NLITPIMGCSLNNILSEDYISTDIKEEAASWQGGNQSDCSINPLTEQIQGTDTPTPIMGC
SLNILKMEGNKYDENSLESPHKSHTTKNTLYRKYSSNECQKHFTDKRHFDQHCRTHKSKK
PFSSSDCGKYFSIRSNLKRHQVTHTGEKPFSCSSCGKCFLSQSHLARHQRTHTGEKPFSC
SECEKCFANKSDLKRHQITHTGEKPFSCSECGKCFVNESNLDRHKISHTGKKPFSCSECG
KCFSIEYHRDSHQKIHTGEKPFFCSECGKCFTNRSNLARHQRTHTGEKPFSCSECGKCFL
NHSHLARHERTHTGEKPFSCSECGKCFANQSDLKRHQLTHTGKKSFSCSECGKCFADESH
LDFHKITHTGEKPFSCSECGKCFSKRSDLARHERTHTGEKPFSCSECGKCFSNKSDLKRH
QITHTGEKPFSCSECGKCFSKQSNLACHQRTHTGDKPFSCSECGKCFCNEFRRDRHQRIH
TGVKPFPCSECGKCFSKQSNLACHQRTHTGEKPFSCSECGKCFSKQSHLICHQRTHTGEK
PFSCSECGKCFSNEYHRDRHQRIHTGEKPFSCSQCGKCFTNRSNLDRHRRTHTGEKPFSE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtgggaggaagcgagtgacccagtgatggggaagaaggataaaaatgaggag
cggaaggagagaatcctgaatctcacactggagattatctatctgctgactggagagggc
tacgtcatccctaagaagaagagcccaactgtgggtttgggggccctgcatgcccctggc
tccgtcatacagaaggaaaatgacaagaagatcctggaactcatctccaacatcatccag
ctgctgactggagaggttgccataaggtgtgaggatgtttccatctatttttccttggag
gagtgggagtatataaaaggaaacaaggccctttacagggaagggataaaggaggaggag
gaggagccccagcagctccgcccactggcctgtgagtataaagatgggagcgatgttaca
gcacatacggaagcaactttatgttgtaataatgatgggaatctcacaaaccctgatgtt
tctccagcggaacagctcccaccggccaatgggattaaagaggaaccggcttcatgggaa
gggggaaaccaatcagattgcagcattaatccccttacagaacagatacagggaacagac
acacctactcctatcatggggagcagcctgaataacagctcggcagaggattatatatca
catacgattaaggaagaagcatgtttatgtgaagggagaaaacattcagactgcagcatt
aatcttattactcctatcatggggtgcagtctgaataacatcttgtcagaggattatata
tcaactgatattaaagaggaggcagcttcatggcaaggtggaaaccaatcagattgcagc
attaatccccttacagaacagatacagggaacagacacacctactcctatcatggggtgc
agcctgaacatcttaaaaatggagggtaataaatatgatgaaaattccctcgaatctcca
cataaatctcacacaacaaaaaatacattatataggaaatacagcagcaatgagtgtcag
aaacactttactgataagagacactttgatcaacattgtagaacccacaaaagtaaaaaa
cccttttcttcttctgattgtggaaaatatttttcaattcgatccaaccttaaacgccat
caagtaactcacacaggggagaaaccattttcatgttctagttgtgggaaatgtttttta
agccaatcccaccttgctcgtcatcaaaggactcacacaggggagaaaccattctcttgt
tctgaatgtgagaaatgttttgcaaacaaatctgaccttaaacgccatcaaataacccac
acaggagagaaacctttttcttgttctgaatgtgggaaatgctttgtaaatgaatctaac
cttgatcgtcataaaatatcccacacagggaagaaaccattttcttgttctgaatgtggg
aaatgtttttctattgaatatcaccgtgattcccatcagaaaattcacacaggagagaaa
ccatttttttgttctgaatgtggcaaatgttttacaaatcgttctaaccttgctcgtcat
caaaggactcacacaggggagaaaccattctcttgttctgaatgtgggaaatgtttttta
aaccattcacaccttgctcgtcatgaaaggactcacacgggggagaaaccattctcttgt
tctgaatgtgggaaatgttttgctaaccaatctgacctaaaacgccatcaactaacccac
acaggaaagaaatctttttcttgttctgaatgtgggaaatgttttgcagatgaatctcac
cttgattttcataaaataacccacacaggggagaaacctttttcttgttctgaatgtggg
aaatgtttttcaaagcgatctgaccttgctcgtcatgaaaggactcacacaggggaaaaa
ccattctcttgttctgaatgtgggaaatgtttttcaaacaaatctgacctaaaacgccat
caaataacccacacaggagagaaacctttttcttgttctgaatgtgggaaatgtttttca
aagcaatctaaccttgcttgtcatcaaagaactcatacaggggacaaaccattctcttgt
tctgaatgtgggaaatgtttttgtaatgaatttcgccgtgatcgtcatcagagaattcac
acaggagtgaaaccttttccttgttctgaatgtgggaaatgtttttcaaagcaatctaac
cttgcttgtcatcaaagaactcacacaggagagaaacctttttcttgttctgaatgtggg
aaatgtttttcaaagcaatcccaccttatttgtcatcaaaggactcacacaggggagaaa
ccattctcctgttctgaatgtgggaaatgtttttctaacgaatatcaccgtgatcgtcat
cagagaattcacacaggagagaaacctttttcttgttctcaatgtgggaaatgttttaca
aatcggtctaaccttgatcgtcatcgaagaactcacacaggggagaaaccattttctgaa
tga
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