Xenopus tropicalis (tropical clawed frog): 100488748
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Entry
100488748 CDS
T01011
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100488748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100488748
04090 CD molecules [BR:
xtr04090
]
100488748
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
SIRP family
100488748
CD molecules [BR:
xtr04090
]
Proteins
100488748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
Ig_2
I-set
V-set
C2-set_2
ig
V-set_CD47
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
100488748
NCBI-ProteinID:
XP_031748657
UniProt:
A0A8J1ISS9
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Position
9:complement(1297850..1308569)
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AA seq
463 aa
AA seq
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MREAIGATKLPLRILGFLCLFLLHQTGSVLEVTAPSPHVAQKGSDTLIPCTFRIDPFPAD
PKLLNIKWNFNGQIRLSCTDSEVSTTDPRFSLNPNSALLGEASLSVSNAQISDGGTYSCS
VTYGTEWQEKEIRLEIQAPPQINITNKLVTENKESTLSAAITGFYPVDIDIKWLREGEIL
AGGTELPPQRNADGTYRVTSTVTIVPTEGNRNQIFSIRVQHESLSAPLQEDFQLLYEAAP
MMNISHEPFYVNEEQTLMCRVWGYYPEDIAVSWFLNGSRVEPSEIKRINSSALELPYRFL
PTAESQGMEISCVVEHRALTEPLVQSLKVELTDAEWSLTKRIVVGILISLVAALCLGFVV
LKLKGRCCSATGNRRGAEQPTELQPLSPPRAADQQRSRATQNEDDECSQEEISSRDPQEL
MATSNGAQEGSESAAAETQRDQGTHPPSEEEENVGGGDQESGD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagcaatcggtgccactaaactgcccctcaggattctgggatttctctgcctt
ttccttctgcaccaaacagggtcagttctggaggtgactgctccgtccccccacgttgcc
cagaaaggatccgacaccctgattccctgcacattccgtattgatccattccctgcggat
cccaaactcttgaacataaagtggaattttaatgggcagatacgactgtcgtgcactgat
agtgaggtgagcaccacggacccccggttctccttgaaccccaattccgctctgttggga
gaggcctctctgtctgtctctaacgctcagatatccgatggggggacctactcctgctcc
gtcacttacggcaccgagtggcaagagaaggagatcaggctggaaatccaagcccctcca
cagataaacatcaccaataaactggttactgagaataaggagagcaccctgagtgccgcc
attactgggttctaccccgtggacattgacattaaatggctcagggagggggagatactg
gctggtgggactgagctccccccccagagaaatgcagatggtacataccgagtgaccagc
acagtgaccattgtacccaccgaggggaacaggaaccagatcttctctatccgggtgcaa
catgagtctctctctgccccattacaggaggatttccagctgctctatgaagccgccccc
atgatgaatatcagccatgagccattttatgtgaatgaggagcagacgctgatgtgccga
gtgtgggggtattacccagaagacattgctgtgagttggttcctgaatggatctcgggtg
gaaccctcagagataaagagaattaacagttctgctctggagttgccctaccggttcctc
ccaacagctgagagtcaggggatggagatctcttgtgtggtggaacatcgggccctgacg
gaacctcttgtgcagtcactgaaggtagaactgacagatgctgaatggagtctcactaaa
cgaatagtagtaggaattcttatttcacttgtggccgcactttgcttgggttttgtggtt
ctgaaactaaagggaagatgttgttcagccacagggaatagaagaggggccgaacaacca
actgaacttcagcctctgagccccccccgggcagcggaccaacaacgttcacgagcgaca
cagaatgaagacgatgaatgttctcaggaagaaatttcatccagggacccacaagaacta
atggcaacgtccaatggggcccaagaaggttccgaatcagcagcggcagaaactcagaga
gaccagggaacccacccacccagtgaggaagaggagaacgtggggggaggagaccaagaa
tcaggtgactga
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