Xenopus tropicalis (tropical clawed frog): 100488778
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Entry
100488778 CDS
T01011
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488778 (arhgef38)
Membrane trafficking [BR:
xtr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100488778 (arhgef38)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_2
BAR
SH3_1
DUF29
Motif
Other DBs
NCBI-GeneID:
100488778
NCBI-ProteinID:
XP_002934822
Xenbase:
XB-GENE-952283
UniProt:
F6PVC5
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Position
1:complement(72507506..72543218)
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AA seq
781 aa
AA seq
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MEAKEGNGKDTSTVLPKRRNLTFLKSRLYMLERRKTDTIVEPSNNVDCGISGTLRRSQSD
RTEYNQKLKEKMAPNVSSSAPVSPTQSSEELQQRKIIKRTKIIGELIQTEKDYLNDLELC
IREVVTPLRSNHSEQIDVDALFSNIESVCQISAKLVSLLEDATTNVEPELQVIGEVFLEI
KCPMEDVYKIYCYQNDEAHTVLESYEKDPEIKEHLKHCTQALKKIYEDQGKPNLLDMGSL
MIKPIQRVMKYPLLLCELLNATPQCHPDYKPLQDAFTSVRTTNMNINELKRRKDLVLKYR
RADEEESLKDKLSKLSIHSITKKSKRVTSHLKILTGGEQVKDQIFNKEEKIFRSLEKTVR
LCVKNISFTLQHMQDVMPLAAQGVMEMHRILHDDNHNSNKNLNNHNKIGEQYGNFVNRLE
QLVYMPLSTLHAMFPMPQKLIQKRYDKLLDYHSCLQKPPDGVLDQARKDYEALNAQLVEE
LQTFNKAARKILSNCLYFFITLMRELLSAALESASNIADDFIICGNVNNVQQHIIEELQN
LNFCKENSTATFIERKLSFERKKTLSPLPELPRQSESHRSKLLSTYGAEKLYQAKRKCNA
SQELDIDLYEGEMVALVEDKDPFGSTSRWLVDTGIVQGYVYSSFLKPHHPGKMQKDSPDS
AFCDDDFDNFSLFVSPRPPRDRNSRASVGSTSESNPSINGDADMLHECDGDSSLNGDDYE
IFYAVYAFEARSQQELSLQENQRVRILQFSDQSGNKEWWLGEAHGQKGYVPANYLGKMTY
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaaggaaggcaatggaaaggatacatctacagtattaccaaagagaaggaat
ctgaccttcctgaaaagtagattgtacatgttagaaaggagaaaaactgacaccattgtg
gagcccagtaataatgtggattgtgggatctcaggcaccttgcgcaggagtcagtctgac
aggacagagtataatcagaagctaaaagaaaaaatggccccaaatgtttcatcatcagct
ccagtatccccaacgcaatcttcagaggagctgcaacagaggaagattatcaaaaggact
aagattataggtgagctgatccagacagagaaggactatctgaatgacttggagctctgc
atcagagaagtagtaacacctcttagaagcaatcatagtgagcagattgatgtggatgcc
ttgttcagcaacattgaatctgtttgtcagatttcagctaagctggtgtcactgcttgaa
gatgccactacaaatgtggaacctgaacttcaagtgataggggaagtattcttggagatt
aagtgcccaatggaagatgtatataaaatctactgctaccaaaatgatgaagctcacact
gtgctggagtcatatgaaaaggatcctgaaataaaggagcatttgaaacattgtacacag
gccttgaaaaagatttatgaagatcagggcaaaccaaacctgttggacatgggatctctc
atgattaagccaattcagcgtgtgatgaaatacccactgttgctatgtgaactgctgaat
gccactcctcagtgtcacccggactataaaccacttcaagatgcatttacgtcagtcaga
accaccaatatgaacatcaatgaactgaaaagaaggaaggatctagtgctgaagtacagg
agggcagatgaagaagaatctctgaaagacaagctttccaagctcagtattcactccata
actaaaaaatccaaacgagtaaccagccatctgaagattctgactggcggagagcaggtg
aaagaccaaatatttaacaaggaagaaaaaatatttagaagtttggaaaagactgtgaga
ttgtgtgtgaagaacatttcctttacccttcaacatatgcaggacgtgatgcccctggct
gcgcaaggtgttatggagatgcatcgcattctacatgatgataaccacaatagcaacaaa
aacctgaataaccacaacaaaattggagaacagtacgggaactttgttaacagactagaa
caacttgtctatatgcctctgagcacacttcatgctatgtttcccatgccccagaagcta
attcagaagcgctatgacaaacttttggactaccacagttgtctacaaaagccacctgat
ggtgtgctggatcaggcacgaaaagactatgaggctctaaacgctcagctggtggaagag
ctgcaaacctttaacaaggccgcccgtaaaatcctctccaattgtttgtacttcttcatc
actcttatgagggagcttttgtctgctgcattggagtcagcttcaaacattgccgacgat
tttatcatctgtggaaatgtaaataatgtccagcagcacatcattgaagaactgcagaat
ctcaatttttgtaaggaaaacagcactgccacgtttattgagagaaagctgagctttgag
aggaagaaaactctttcccctttgcctgaactccctcggcaatctgaaagccacaggagc
aagctattgtctacttatggtgcggaaaaactttatcaggcaaagcgcaagtgtaatgct
tcccaggagcttgatatagatctctatgagggagagatggtggcccttgttgaggacaag
gatccctttggcagtaccagcaggtggcttgtggacacaggaattgtacaaggatatgtc
tattcctccttcctgaaaccacatcatccaggaaaaatgcaaaaggactcacccgacagc
gcattctgtgatgatgattttgataacttcagcctttttgtctcgccacggccaccccgg
gacagaaatagcagagcttctgtggggagtacaagtgaaagtaatccctccattaatggg
gatgctgacatgcttcatgaatgtgatggggacagttcactcaatggagatgattatgaa
attttctatgctgtgtatgcttttgaggctcggagccaacaggagctcagccttcaagag
aatcaacgagtcaggatccttcaattctcagatcagagtggcaacaaggaatggtggctt
ggagaagcgcatggccagaaaggttatgtgccagctaactacttaggcaagatgacatac
gcttaa
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