Xenopus tropicalis (tropical clawed frog): 100488790
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Entry
100488790 CDS
T01011
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100488790 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100488790 (herc3)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100488790 (herc3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
HECT type E3
100488790 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
MOV-10_beta-barrel
ACDC
Motif
Other DBs
NCBI-GeneID:
100488790
NCBI-ProteinID:
XP_002938676
Xenbase:
XB-GENE-968537
UniProt:
A0A6I8QXP8
LinkDB
All DBs
Position
1:complement(78839087..78873557)
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AA seq
1050 aa
AA seq
DB search
MLCWGHSTFGQLGNGHSFQGSVSDPCVCRFSLAACVKEVACGGKHTLFLLEDGQVYSCGW
NGEGQLGHDHEGTDPVQVTTLTEEHITHIACGQSHNLALSYQGQLYSWGSGNDGQLGHAT
VEHSSRIPRIIKKLNQQKIQQVSCGNDHCMALGDDGQLFTWGQNLHGQLGLGNGFLSQSS
PQRVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGNNSAGQLGLNDEKVRETPCHVKPLR
THKVIYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLNNEINPRRVLELMGSEVSQIA
CGRQHTLAFVPSSGTLYAFGCGDLGQLGTGHKNNVKCPAVVKGKWAAHSGQISMHADRAA
YNIVKQIFSGGNKTFVLCSKLESSQPADDFRFCSQRNHTSVINEETIDVWRQKVLENSNT
NSMNGIVQTLSSLACWNGSFLEKRNDEHFRTSPKIPGINMCSIKVLFEKLMNVHHSRLLE
QILKGFESFLIPQLSSSPPDVEAMRIYIILPEFPLLQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWAQVCPKYFLKLISLYKEAVVYLLNGRKTLLIPVLFTSYITAALKLLEKLHKV
NGKAQHVEHDTFYIPEISSLVDIQEDYLMWFLNEAGLKLRPTIMQDSITLCSYPFVFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLDPMLVKNPFLVLHVRRTSLVADALRELS
IYSDIDLKKPLKVIFDGEEAVDDGGVTKEFFLLLLKELLNPIYGMFTVYQDSNLLWFSDI
CFVEHNWFHLIGIMCGLAIYNFTVVDLYFPLALYKKLLNVQPTLEDLKELSPTEGRSLQE
LLDYPEDDVDDVFCLNFTICRESYGLAERRPLVAGGDHITVTKDNRQQFVDAYVNYVFNQ
SVQEWYEAFSTGFLKVCGGKILELFQPSELRSMVVGSNNYNWQELEENAIYKGDYSTAHP
TVRMFWETFHDFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSISSGEDHLPVAHTCYN
LLDLPKYSSKETLRRRLTQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggtcactctacttttggccagcttggtaatggtcatagtttccaaggt
tctgtgtccgacccttgcgtatgcagattctccctagcagcatgtgtcaaggaagttgcc
tgtggagggaaacatacgttatttctgctggaagatggccaggtttatagctgtggctgg
aatggagaaggccagcttgggcacgaccatgaagggaccgatccagttcaagtgactacc
ttgacagaagaacacataacacacattgcttgtggacaatcacataacctggctctcagt
taccagggccaactctactcttggggatcagggaatgacggacagttgggacatgccact
gtggagcattccagtagaataccaagaataatcaagaaattaaaccaacaaaagattcaa
caagtttcttgcggtaatgatcattgcatggctcttggagatgatggccagttatttaca
tgggggcagaacttacacggtcagctgggactgggaaacggcttcctctctcagtcctca
ccacagagagtgaagtcattggaaggcataccccttgctcaggtcacagcaggtggatct
cacagctttgccttgtccctctcaggggcagtgtttggatggggcaacaacagtgcagga
caacttggcttaaatgatgaaaaagttagagagacaccttgccatgtaaaacctctgcgc
actcacaaagttatatacatcagctgcggagaagaacatacagccatcctaacaaaggct
ggaggcctttttacatttggagctgggggttcgggacagcttggccatgattctcttaat
aatgagataaatcctaggcgtgttcttgagctgatgggaagtgaagtctctcagattgca
tgtggcagacagcatacccttgcctttgtgccttcttcaggaactctctatgcatttgga
tgtggagatctagggcagctgggtactggacacaaaaataatgtgaagtgtcctgctgta
gtcaaaggaaagtgggctgcacatagtggacagatctctatgcatgctgatcgtgctgca
tataatatagtcaagcaaatcttctctggaggaaacaagacatttgtgctgtgttcaaaa
ttggagagctcacagcctgcagatgattttcgtttttgcagccagagaaatcacaccagt
gtcattaatgaggaaaccattgatgtctggagacagaaagttttggaaaacagcaatacg
aattcaatgaatgggatcgtccaaaccctgtcatctttagcatgctggaatggaagcttc
ttggagaagagaaatgatgagcattttagaactagtccaaagatccctggaatcaacatg
tgttctataaaagtgctttttgagaagctgatgaacgtccaccattctcgattacttgag
cagatccttaaaggctttgagagttttttgatacctcagctgtccagctctccacccgat
gtagaggcgatgaggatttatattatccttccagaatttcctttgcttcaggattccaaa
tactatatcacactaacacttcctttagccatggcgattttaaggcttgacaccaaccca
agcaaagtgttagataactggtgggcgcaagtttgcccaaagtatttccttaaacttatt
tccctctataaagaagcagtggtatatctcctgaatggaaggaagaccttactgatacct
gttttgtttaccagctatataactgctgctcttaaactcttggaaaagttacacaaggtt
aatgggaaagcacaacatgtagagcatgacacattttacattcctgaaatctccagcttg
gttgatattcaagaagattatctcatgtggtttttaaatgaagcaggactgaaacttcga
cccactattatgcaggattctattacgctctgttcctacccttttgtgtttgatgcccaa
gcaaagacaaaaatgttacaaacagatgcagagttacagatgcaggtagctattaatggt
gctaacctacagaatgtgttcatgctgctcactttggatccaatgttggtaaagaatcca
tttctagtgcttcatgtacgcagaacaagccttgttgctgatgctttaagagaactgagc
atttattctgatattgacttgaaaaagccgttgaaggtcatatttgatggtgaagaagca
gtggatgatgggggggtcactaaagaattctttcttctgcttctgaaagaacttttgaat
cctatctatggaatgttcacagtctaccaagattcgaacctgctttggttttcagacata
tgttttgtagagcacaattggttccatctgattggcatcatgtgtggcttggccatctat
aacttcacagtggttgatctgtactttccattggcattgtacaaaaagttattaaatgtg
cagccaacattagaagaccttaaggaactttctcccacagaaggaaggagccttcaggaa
ctattggattaccctgaagatgacgtagacgatgtgttctgcctcaattttactatttgc
agagaaagttacggactagcagagcgcagacctttagtggctggaggagaccacataact
gtgacaaaagataacaggcagcagtttgttgatgcttatgttaactatgtcttcaaccag
tcagtgcaagaatggtatgaggcattttccactggcttcctgaaagtctgtggaggtaaa
attttagaacttttccagccatctgaactcaggtccatggttgtgggaagcaataattat
aattggcaggagttggaagagaatgcaatctacaaaggtgactattccactgcacatccc
accgtgagaatgttctgggagactttccatgattttcctttggagaaaaagaagaagttt
ctcttgtttctcactggcagtgatcgtattccaatctacggaatgtcaagccttcgtatc
attatccagtccatatcgagtggggaggatcaccttcctgtggctcacacgtgttacaac
cttctggacctaccaaagtacagcagtaaagaaacgctcaggagaagactaacccaggct
attgatcattatgagggctttagcttagcttga
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integrated database retrieval system
