Xenopus tropicalis (tropical clawed frog): 100488852
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Entry
100488852 CDS
T01011
Symbol
pprc1
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform X1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100488852 (pprc1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
100488852 (pprc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100488852
NCBI-ProteinID:
XP_004915920
Xenbase:
XB-GENE-6469512
UniProt:
A0A6I8RN86
LinkDB
All DBs
Position
7:32127538..32151007
Genome browser
AA seq
1735 aa
AA seq
DB search
MAARWGAGEETLTIGGMELFTAGGPLQCNTLEDHEPCSGLSDLSLDAGGFLGTFQGYVDH
SIISIIDDTGALAENKGHFDEENELSLLNALTEILDNADDENMSPFDTIPDTELLVSPKD
KENSTFQRFLSLSRTPPDRAVSPLDDQRRINGKFDSHTSGQNWELFPENISSTPKRHNRQ
RNMRACLTRRLRPELTQQRSDGEDEEVPSPEKNSEINAALDLEQEFAVNSVNRENEFEED
AFVKRTPCIINTENVALNDLVKYMHPYCLPSVAACMDPKESEVEDNLNEGIFLEIVANGK
CIKLPVVIEPAEEMSEGLEERIYLSGENNSDVEMQESSEEQCRSLQDSDQHLVKTTDECT
QLLQEPILLDCNKMLPVLSSQEEEPTLEPQQNDTVAKEPIFEPTSVDNGLSETIFKQCND
FNTESDNQNLEPAESGPVKDIDPESCLQDTCKERVVQKGKKSDKTNHSQKSKGKMKKKTT
ECKQQDVVERMTLQNNQPPVCLSNPVVQESDFLIKQLEQVKRETQMELRSSKLVRAKART
RLTIDTSSAPVKKIHNEKTKKIEKSLAIENEKTKRSSENADTEKCLVQNNVKSLCEQAES
KSAELAEGDTVLDDKHVHPQEAESKDYIPNVQLKESLNDKGTVKGDIENDANAVQMSKEA
KPKSLSLSEYRMRMQQRKGNTVQRDNESTSESKWPSIPEPPTELAEIPCLVVPGKEEVPV
KPSKAKPLEEKSCDISRAEEPSGLENSSNLVSALSKASVQSVPTAETLQPKQPDVLTQTI
DATFSVTQPSVPPPPFYTPTWPSVPLQPPYYPSIPPPPAVPFPRGGPHDPLHTLPMPPPP
VISWPPFPPPPFAMGPNPSPELPLWGAGIPPPPLPFWPHPPVQQGLHGVQQGLPGRGPPL
LSTDGTTGGAMPPVSSIELNKNTDSHMSKETYVASNKHCSQNISTESSKKTSPLQKCSNS
LVSKDRNASDLPKHPRELTNQTKVPLKKSENRSTKLSAQLHSDLRKSDLPKHARSVEKTP
ENVPAEPKKANLLDPNLKSANPVVLKIMEILKKAQKLGFQINPQQPLESGSAKSGTCLSS
PKLAISVPLQPVQNQKPGVPCKEQVNVNTSTLKESLSTDPVLEKQRAKETLNVASEVQKQ
ETAESSQAPNIQLAQMPVSKVATLGDSRADLNIKIPSAVANDGQTTGENSSCEEGIEATD
LTSLLEQFEKSEANNEEQHTQSPELKVAVGNSGLERPVEKKVLDRLLAPELANTAGLTPP
ATPPHQMWKPAIASSLTGKAKPLHGNFQDRACASPLKAAKLIEAKPLPQSKLRNKSTAIP
PVYAQPPIHVASGDHDYCILATSKCPVAASSSSNPETVATTQNTHCEEGSRWNVKHHQNI
TIKPIVPFNKRGQNKTCQNQATTPQLADVCNRSTPCGTNKFVPSISNIQNDTNDPLDHRT
NKVEDVAGKHPGSVLMSPDASPCHSEDWETRTSVRREDTSVSRRALRCYRRYRSSPSPQK
SSGSRSCSSDSSCSSSSSSSRSRSPPSKRRRISRSRHRSRSSSRSRYHGSSSRSWSSSSS
CSSRSCSPSSSCSRSRSRSPYRRRYRSRSRRCESQESSNRQKILHKERAIEERRVVYIGK
INSRMTRSELKSRFSAFGEIEECTIHFREEGDNYGFVTYRYTCEAFAAIENGHKLRLPDE
LPFDLCFGGRRQFCKSSYADLDSNKDDFDPAPVRSRFESLDFDTLLKQAQKGIRR
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcggtggggagcaggagaggagactttaaccatcggaggaatggagctcttc
accgccggaggccctctccagtgcaataccctggaggatcatgagccttgttccggcctt
tcagacctcagcctggatgcaggaggattcctgggaactttccagggctacgtggatcat
tctatcatatctatcattgatgatactggtgcattggctgaaaacaaaggtcactttgat
gaagaaaacgagctgtcacttctgaatgctctaacagagattctggacaatgccgatgat
gagaatatgtctccatttgacaccatcccagatacagaactactcgtttccccaaaagac
aaagaaaactctacatttcagagatttttaagtctatcccgtacaccgcctgatcgagcg
gtatcccctttggatgatcaacgcagaattaatggcaagtttgactctcacacatcaggt
cagaattgggaattgtttccagaaaacatcagttctacaccaaagagacacaacaggcag
aggaacatgagggcatgtttaacacggaggttaagacctgagcttacccaacagcgaagt
gatggggaagatgaagaggtcccaagcccagaaaagaactctgaaataaacgctgctcta
gatttggaacaagagtttgcagttaattctgtaaacagggaaaatgaatttgaggaggat
gcatttgtgaagagaacgccttgtataattaatacagaaaatgttgctcttaatgacctt
gtgaaatatatgcacccatattgccttccatcagttgctgcttgcatggatcctaaagag
tctgaggttgaagataatctaaatgaaggcatatttcttgaaattgtagcaaatggaaaa
tgtattaaattgccagtggtgattgagccagctgaggagatgtctgagggtttggaagaa
aggatctatctttcaggggaaaacaattctgacgttgaaatgcaggaatcttctgaagaa
cagtgtagatctctacaggatagtgatcaacatttagtaaagactacagatgaatgtaca
caattattgcaggaacctatacttttggactgcaacaaaatgttgcccgtgttatcctct
caggaggaggaacccactttggaaccacagcaaaatgacactgtggccaaggaacctata
ttcgagcctacttcagtagataatggtttaagtgaaaccattttcaaacagtgcaatgac
tttaatacagaaagtgataatcagaatcttgagccagcagagtctggtcctgtaaaggat
attgatcccgaatcttgtcttcaagacacatgtaaagaacgtgtggtacagaaggggaag
aaatctgataaaacaaatcatagccaaaaatccaagggtaaaatgaaaaagaagacaact
gaatgtaaacagcaggatgttgttgaaagaatgacactacaaaacaaccagccccctgtg
tgtttgagtaacccagtagtgcaagagtctgattttctaataaaacaattagagcaggtt
aaaagggaaactcagatggaactcaggtcttctaaactggttagagcaaaagcacgaaca
aggctaaccattgatacttccagtgctccagtgaaaaaaattcacaatgaaaagactaaa
aagatagagaagtcccttgctatagaaaatgagaaaacaaagagaagttcagaaaatgct
gatacagaaaaatgtttagttcaaaacaatgtaaaaagtttgtgtgagcaagctgaaagc
aaatcagctgaacttgctgaaggggatacagtattagatgacaaacatgtccatccacaa
gaggctgaaagtaaggattacattccaaatgttcagttaaaagagagtttgaatgataag
ggcacagtgaaaggggatatagaaaatgatgctaatgcagtacagatgtctaaggaggcc
aaaccaaagtccctcagtttaagtgaatacagaatgcgaatgcaacagcgcaaagggaat
acagtgcagcgagacaatgaaagtacatctgaaagtaaatggccgtccattcctgagccc
ccaactgaattggcagaaattccttgtttggttgtacctggaaaggaagaggtcccagtg
aaaccatccaaagcaaagccattagaggaaaagtcttgtgatatatccagggctgaagaa
ccctctggcttggagaactcatctaacttagtttctgcattgtcaaaagcatctgtacag
tcagtaccaactgcagaaactctgcaacctaaacagcctgatgttctgacacaaactata
gatgctactttcagtgtgactcaaccaagtgtgccaccaccccctttttatacacccacg
tggccttctgttcctttgcagcccccatactatccaagtatacctcctccacctgcagtt
ccatttccaaggggtggaccacatgatcccttgcacacccttcctatgcctcccccacca
gttatttcttggcctccttttccaccaccaccttttgcaatggggcctaatccctcccct
gagctgcctctatggggagctggaatcccacctccaccacttcctttttggccacatccc
ccagtgcagcaaggtttgcatggcgtacagcaaggattacctggaagaggaccaccgttg
ctgagcactgatggaactactggtggtgccatgcctccagtttcttccattgagcttaat
aaaaatactgattctcacatgtctaaagagacctatgttgcatctaataaacactgtagt
cagaatatttctacagaaagtagtaaaaaaacaagtcccttacagaaatgtagtaatagt
ttagtttcaaaggatagaaatgccagtgacctaccaaaacatccaagagagttaactaat
caaaccaaagtgccccttaagaagtctgagaatagatcaacaaagctatctgcacagtta
cactctgacctcaggaagtcagatcttcctaaacatgccagatcggtggagaagacacca
gaaaatgtgccagcagagccgaaaaaggctaatttgctagatccaaatctcaaatctgct
aatccagtggtcttaaaaatcatggaaattttaaagaaagctcaaaaacttggtttccaa
ataaaccctcaacagcctttggaatctggaagtgcaaaatcgggaacatgtctctctagt
ccaaaattggctatttctgtccccttacagccagttcaaaatcagaagcccggagtccct
tgcaaagagcaagtgaacgttaatacatcgactcttaaggaaagtctcagcacagatcct
gtcctggagaaacaacgggcaaaggaaactctaaatgtagcatctgaagtgcaaaaacaa
gagacagctgagagttcacaggctcccaatatccaactagcccagatgccagtatccaaa
gtcgccaccctgggagactctagagctgatttaaacatcaagatcccttcagcagttgcg
aatgatggccagactactggggaaaactcctcttgcgaagaaggtattgaagctactgat
ctaaccagtcttctggaacagtttgaaaagtctgaggctaacaatgaggagcaacacaca
caaagtcctgagttaaaagtggctgtaggaaactctgggttggaaagaccagtggaaaag
aaggtactggatagacttctagctcctgagttggccaatactgctgggttaactccacct
gcaactccaccgcatcagatgtggaagccagctattgcctcgtctctgactggaaaagca
aaaccactgcatggaaacttccaagaccgagcttgtgcttctccacttaaggctgcaaag
ttaattgaagcaaagcctcttccacagagtaaactacgcaacaaaagtacagcgattcct
cctgtttacgcccaaccgcccatccacgtggcatcaggtgatcacgactattgtattctt
gccacctccaagtgtccagttgctgcttcgtcttcgtctaaccctgaaactgttgcgaca
acccagaatacccattgtgaagaaggctcccgatggaatgttaagcatcaccaaaatatt
accataaagcctatagtaccatttaataaaaggggtcagaacaaaacgtgtcagaatcag
gccacaactcctcaacttgctgatgtatgcaaccgaagtactccctgcggcactaacaag
tttgtaccatctattagtaatattcagaatgataccaatgatccactagatcataggact
aataaagtagaagatgttgcaggaaagcacccaggttcagtattaatgtctccagatgcg
tcaccttgtcacagtgaagactgggagaccagaactagtgttagaagggaagatacctct
gtttcccggagagctttgcgctgctacagaaggtacagaagttctccaagccctcagaag
tccagtggtagccgttcctgtagttcagattcttcgtgctcttcatcctcttccagttct
cgctcaagatcacctccatcaaagaggcggagaatatcaagaagtcgccacaggtcccgc
tcttcgtcccgatctagataccatggctcaagcagcaggtcttggtcatcatcttcctca
tgttcctcccgctcctgctctccatcctcaagctgctctcgctcccgctccagatccccc
tatcgccggaggtacaggagcagaagtagaaggtgtgagtctcaagagagctctaatagg
cagaagatcctgcacaaagagcgggcaatagaggaaaggagagtcgtctacatcggcaaa
attaacagtcgcatgactagatctgagctcaaaagccggttttctgcttttggggaaata
gaggagtgcaccattcacttcagggaggaaggtgataactatggctttgtcacctaccgt
tatacttgtgaagcctttgctgccatagaaaacggccacaagctgcgacttccagatgaa
ctgcctttcgacctctgttttggtggcaggagacaattctgtaagagtagctatgccgat
ctggattcaaacaaggatgattttgatccagcaccggttaggagcagatttgaaagttta
gatttcgatacattattgaagcaagcccagaagggtatccggaggtaa
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