Xenopus tropicalis (tropical clawed frog): 100488862
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Entry
100488862 CDS
T01011
Symbol
gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100488862 (gabra6)
04082 Neuroactive ligand signaling
100488862 (gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100488862 (gabra6)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
GABA-A
100488862 (gabra6)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100488862
NCBI-ProteinID:
XP_031754593
Xenbase:
XB-GENE-6049732
UniProt:
A0A7D9NMA9
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Position
3:24288443..24309706
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AA seq
455 aa
AA seq
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MASFIMWIYIFLCTGKALGNNITAANLHSENITRILDRLLDGYDNRLRPSFGGPVTEVKT
DIYVTSFGPVSDVDMEYTMDIFFRQTWVDERLKFDGPTEILRLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTVLYTMRLTIKAECPMRLMNFPMDGHACPLKFGSYAYP
KSEIVYTWKKGPLYSVEVPEESSSLLQYDLVGQKVSSETLLSNTGEYSLQVVMFFLQRKI
GYYIIHTYIPCSMTVVLSQVVFWINKESVPARTVAGITTVLTMTTLSISARHSFPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQIQKTMMKAAKKAALAAATARAENEFVTLS
DSNCNLKKRINSVASQGNQSTEGDLPLYEDSPYNEQTDIPTRDHMLSDTTSSQHTGTSKI
DKYARILFPLSFAGFNLVYWVVYLSKDTMDIIRSD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttattatgtggatatacatattcctatgtacaggaaaagcactaggaaac
aatatcactgctgcaaatctgcattctgaaaatataacccggatacttgataggctgctg
gacggttatgacaacagactccgacctagctttggaggtcccgtgactgaagtcaaaaca
gacatatatgtgaccagttttggccctgtatcagatgtcgatatggaatatacaatggac
atattttttcgccagacatgggttgatgaacgactcaaatttgatggaccaacagaaata
cttaggttgaacaacttaatggtcagtaaaatctggactccagacacttttttcaggaat
ggcaaaaagtctattgctcacaatatgacaacccccaataaactctttcggatcatgcag
aatggaacagtgctctacacaatgaggttgacaataaaagctgagtgcccaatgagacta
atgaatttcccaatggatggacatgcctgccctctaaagtttgggagctatgcctatcca
aaaagcgaaatagtctacacttggaaaaaaggaccattgtattctgttgaggtaccagag
gaatcttcaagtctcctccagtatgatctagttggacaaaaagtttcaagtgagacactg
ttatcaaatacaggtgaatattcactacaagtagtcatgtttttccttcagaggaaaata
ggatactatatcattcatacatacatcccatgcagcatgactgttgttctgtctcaagtt
gtcttttggatcaacaaagaatcagttccagcccggactgttgctggtatcacaactgtt
ctaacaatgaccacattgagtataagcgcccgtcattccttcccgaaagtctcatatgca
acggcaatggactggttcatagcagtgtgctttgcctttgtattttccgcattaattgag
tttgctgctgtgaactattttactaatctccagattcagaaaacaatgatgaaggctgcc
aagaaagcagctctagcagcggcaactgcaagggcagaaaatgagtttgttacgctttcc
gactcaaactgcaatttaaaaaaaagaatcaattcagtggcctctcaagggaaccagtca
actgaaggcgacttgccactctatgaagattccccatataatgaacaaaccgatatcccc
accagagatcatatgctatcggataccacctccagtcagcacacaggaaccagtaaaata
gacaagtatgctagaattctgtttccactgtcgtttgctggattcaacttggtttattgg
gttgtttatttatcaaaagacacaatggacattatacgcagtgactga
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