Xenopus tropicalis (tropical clawed frog): 100488880
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Entry
100488880 CDS
T01011
Symbol
fem1b
Name
(RefSeq) protein fem-1 homolog B
KO
K10349
protein fem-1 homolog B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100488880 (fem1b)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100488880 (fem1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
DUF285
Motif
Other DBs
NCBI-GeneID:
100488880
NCBI-ProteinID:
NP_001238770
Xenbase:
XB-GENE-999856
UniProt:
A0A8J0QFU1
A0A6I8SNT4
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All DBs
Position
3:117701977..117708473
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AA seq
629 aa
AA seq
DB search
MALDGLAGYVYKAAAEGRVLTLAALLLNRTEPEIRTLLSTVTQHGGQRSTPLIIAARNGH
SKVVRLLLEHYKVDVQQTGTVRFDGYIIDGATALWCAAGAGHYEVVKLLVSHGANVNHTT
VTNSTPLRAACFDGRLDIVRFLVENNANISIANKYDNTCLMIAAYKGHTDVVRYLLEQHA
DPNARAHCGATALHFAAEAGHLDIVRELVKWKAAMVVNGHGMTPLKVAAESCKAEVVELL
LAHSDCDTKSRIEALELLGASFANDRENYNLTKTYQYLYLAMLERFRDPSNILHKEVLPP
IEAYGMRTECRTPQELGAIIHNTDALHMEGLIVRERILGSDNIDVSHPIIYRGAVYADNM
QFEQCIKLWLHALQLRQKGNRNTHKDLLRFAQVFSQMIHLNEPVKSWDVEHVLECSVLEI
ERGISRVQNPQEPDAHSALENHECNLYTFLYLVCISTKTRCSEEEQPRINKQIYRLVHLD
PRTREGCTLLHLAVDSGTPVDDFHTNDVCSFPSAPVAKLLIDCGANVNAVDQMGNSPLHV
IVQYNRPISDFLTLHAIIISLVEAGAHTDMTNKEKKTPLDRSTTGVSEILLKTQMKLSLK
CLAARAVRLHNIKYQNQIPRTLEEFVEFH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggccctggacgggctggccgggtacgtgtataaagcggcggctgagggccgagtgctt
actctggctgccctgttactcaatcggaccgaacctgagatccgaactctgctctccact
gtcacccagcacggcggccagagatccactccgcttatcatcgccgcccgcaacgggcac
agcaaggtggtgcggctgcttctggaacattacaaagtggatgtgcagcagactggcact
gtgcgatttgacggatatatcattgatggagctactgccttgtggtgtgctgctggggcc
gggcactatgaagtggtcaagttgctggtaagccatggggcaaatgtgaaccacacaact
gtcacaaattctacccccctgagagctgcatgcttcgatgggagactggacattgtccgc
tttcttgtggaaaacaatgcaaatattagcattgccaataaatatgacaacacgtgcctg
atgattgctgcttacaagggtcacactgatgtagtgcgttaccttttggagcaacatgct
gacccaaatgccagagctcactgtggggcaacagctctgcactttgcagcagaagccgga
cacttagatattgtgcgggagctagtcaagtggaaagcagctatggttgttaatggacac
gggatgactcctcttaaggtagctgctgagagctgtaaggcagaggtggtagaactgttg
cttgcccattcagactgtgataccaagagccgtatagaggcactggaacttttgggagcc
tcttttgccaatgacagggagaattacaacctcaccaagacctatcagtatttgtacttg
gcaatgctggagagatttcgggacccctcaaacattcttcacaaggaggtcctacctcca
attgaggcctatggtatgagaacagagtgtcgaactccgcaggagttaggtgctattatc
cataacactgatgccctccatatggagggcttgattgttcgtgagcgcatccttggttct
gataacattgatgtgtcacatccaataatataccgtggggcagtgtatgccgataacatg
caatttgaacagtgcatcaagttgtggctgcatgcactgcagctgcgtcagaaaggaaat
cgcaatacacacaaagacttgctgaggtttgctcaagtgttctctcagatgattcacctc
aatgagccagtgaaatcatgggatgtggaacatgtgctggaatgtagtgttctggaaata
gaacgtgggatatcccgtgtccagaatccccaagagcccgatgcccattctgcactggaa
aaccatgaatgtaatctctacacttttctttacctcgtttgcatatccacaaaaactcgt
tgctcagaggaggagcagcctcgcattaataagcaaatctaccgccttgtacacctggat
cctagaacccgagaaggatgcactctcctgcatttggcagtggactctggcacgcctgta
gatgacttccacactaatgatgtctgcagtttcccaagtgccccagtggcaaagcttctt
attgactgtggagcgaatgttaatgctgtggaccagatgggtaacagccctcttcatgtt
atagtacaatacaaccgtcctatcagtgattttcttaccctgcatgccattattatcagt
cttgtagaggcaggggctcacacagacatgaccaacaaggagaagaagacccctttggac
agaagcaccacaggggtatcagaaattctactgaaaactcaaatgaagctaagtctgaag
tgcctagcagcccgggctgtgcgacttcacaacattaaatatcaaaatcagatcccgagg
actcttgaagagtttgtggaatttcattaa
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