Xenopus tropicalis (tropical clawed frog): 100488904
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Entry
100488904 CDS
T01011
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100488904 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100488904 (faap100)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100488904 (faap100)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
CPSF_A
Motif
Other DBs
NCBI-GeneID:
100488904
NCBI-ProteinID:
XP_004916408
Xenbase:
XB-GENE-22169433
UniProt:
A0A8J0R3H6
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Position
10:complement(28645772..28746068)
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AA seq
849 aa
AA seq
DB search
MACAMPSVQYLAGFHCPAGGLAAHGAQLIPWKGNVYVSIGKSVYEYSMEKKCMLAVYEFA
TEIWCIELDTKTQQLYILCGQSGIYLLQWDEKGRLLKEPMSATSTGGVNIFFIGVEFCCL
LDPSICYFTVCHEVLVAVSMNQNKWEIRLFNIRSSDHKGNYPSAIREMEISVKPTPGCRD
ICKGNSLPPVLLCVSLWKKEELAVDFHEFTIEPSLFTFLFGIDLAMVNSPVVICGFPDGQ
VVFFPLKTVPSPKSDFTDNQTKSSTRLPLLYNLEQPVVFLGATKAQISDGENNPWTNSSN
KLFCDCILLLGQGGLMVTITAGNKAEGGTYEFREYHLKAPVKSAFCSGPNLYYSTCSDIQ
CVVIPQPGADLQNRILSYSSYNIPMIRAMSPISCCSEGDKEFLALSDKGKLMLFILKQSE
DTAQRARLSCSQAGQRIKELLSQIASVSERASPLKSLIEQRNHSLLNLNKVVAISQAVLT
SRGANMPVRCKVKPLWTRRLQQDCLVASCILENKTDFILESGWNLCIHLSTEGSGTSYSF
SVMNLQPEENMEFIFPLVTEESEHLEFPIKITFALVYSLQELDKSSFQDPQSSLFSHTQS
SICLPLQEHIIDILQCLRLKPHTGQPFPTTFHCMSPLDPVEAFLRSSGGAECKPGQPSAI
SKAICNAESNYAVTLVASVRVASVILHRALKKEDSDTSLCSLLFHWLLSAELPLSQNPVE
VHGMTPNGREFRLRVGEVSAYDLSPANPIPATEVQIISPHLDALACLHLAVIRRLQILAE
KCNQDGCISPEINLDSIQKQVIARESLLKEVKSLLDNLCVRKDLSFESSAKKRLLCLYKE
LRDPGLLLL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcgcaatgccttctgtccagtatctggcagggtttcactgcccagcaggtggt
ctggcagcacatggagctcagttaatcccttggaagggcaatgtctatgtatccattggc
aaatctgtctatgaatacagcatggaaaagaaatgcatgttggctgtgtatgaatttgct
actgaaatatggtgcattgaactggacacaaagactcaacaactttatatactatgcggc
caaagtggaatctacctcctgcagtgggatgaaaaagggaggttgctgaaggaaccaatg
tctgctacaagcacaggaggagtaaacatattctttataggagtggaattctgctgccta
ctggacccttcaatctgttattttacagtatgccatgaagtcttagtcgctgtatccatg
aaccagaacaaatgggaaatcagactgtttaacataagatcttctgatcataaaggcaat
tatccatcagcaatcagagaaatggaaatctctgtcaaacccacacctggatgcagagac
atatgtaaagggaatagtctccctccagttctactttgtgtctctctgtggaaaaaggaa
gaattagctgtggatttccatgaatttacaatagagccttccttattcacgttccttttt
ggaattgacttggcaatggtaaattccccagttgttatctgtggttttccagatggacag
gttgtattctttccactgaagactgttccttctcccaaaagtgactttacagataaccag
accaagtcttcaactcgtttgccgcttctttataatctagagcagcctgttgtttttctt
ggggctacaaaagcacaaatatcagatggcgagaacaatccttggactaatagctctaac
aaacttttctgtgactgcatattgcttttgggccagggaggtctgatggtaacaataact
gctggaaacaaagcagaaggggggacttatgagtttagagagtatcatttgaaagctcct
gtaaaatcagctttctgttctggtcctaatttgtattatagcacctgctctgatatccag
tgtgttgtcattcctcagccaggggcagatctgcaaaatcgcatcctttcttattcaagt
tataacatccctatgatcagagcaatgtctccaatttcttgctgctcagaaggagataag
gaatttttggccctttctgacaaaggaaagctcatgcttttcattttgaaacagagtgag
gatacagcacagagagctagactttcatgttcccaagcaggacagaggatcaaagagctg
ctctcccaaattgcttcggtctctgaaagggcctcaccactgaagtctcttatagagcag
agaaaccattctttactaaatctcaataaagtagtagcaataagtcaggctgtactgacc
agtcggggtgctaacatgcctgtgcgctgcaaagtgaagccattatggactcgaagactt
cagcaggattgtttggttgcatcgtgcatcctagagaacaagactgactttatcttggaa
agtgggtggaacctgtgtattcatctaagtacagagggctctggtacctcgtactccttt
tctgtcatgaatctgcaaccagaagagaatatggaatttatttttcctttagtcacagag
gaaagtgaacatttggaatttcctattaaaattacctttgctttggtttacagtttacag
gaacttgataaaagctcttttcaagatccccagtcttctttattttcccatacacagtct
agcatttgcttacctctacaagaacatatcattgacattttacagtgccttcgtcttaaa
ccacacactgggcaacctttccctaccacctttcattgcatgtctcccttggatccagta
gaggcatttttgaggtcctctggtggagctgaatgcaagcctgggcaaccaagtgccatc
tctaaagctatctgtaatgcagaaagtaattatgcagtaacattggtggcttctgtgaga
gtggcatctgtgatcctgcatcgggctttaaagaaagaagactctgatacctcgctttgc
agcttgttgtttcactggctcctgtcagcagagttaccattgtcccagaatccggtagaa
gtgcatggcatgacccccaatggaagagaatttaggctacgagttggggaggtatctgca
tatgatctgtcccctgccaaccctatcccagccactgaagtccaaataatatctccccac
ttggatgctctggcctgtttgcatttggcagtgatccgtcgccttcagatattggcagaa
aaatgtaaccaggatggctgcatctccccagaaataaatttggatagcatccagaaacag
gttattgccagggagtctttattaaaagaagtgaaatccttgctggacaatctttgtgtg
aggaaggatctaagttttgaatcatcagccaaaaagagacttttatgtttatacaaagag
ttgcgggaccctggcctactcttgctttga
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