Xenopus tropicalis (tropical clawed frog): 100488940
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Entry
100488940 CDS
T01011
Symbol
piezo1
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1 isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100488940 (piezo1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100488940 (piezo1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100488940 (piezo1)
Ion channels [BR:
xtr04040
]
Other channels
Mechanosensitive channel (Piezo)
100488940 (piezo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
DUF1127
Motif
Other DBs
NCBI-GeneID:
100488940
NCBI-ProteinID:
XP_002933721
Xenbase:
XB-GENE-6050252
UniProt:
F6SPB7
LinkDB
All DBs
Position
4:complement(58202956..58297143)
Genome browser
AA seq
2474 aa
AA seq
DB search
MELQVLCGVLFWLLLPGSLLAACLFRYNSLSLVYLFYLLLLPWFAGPNPCSMRGHTGRLM
KALLATSILFLCAHLIFQICLYTIPELDDLLGHNCSSWDVLARHVGINRLDLSDIPNMVR
QVSPDFGMFVVSALCLGLCNRLVTKKRRQRSSGYFEQEEERTELNLKYESRECDTEFEVG
GDLHSVPRDRLLGSWLRKAAYRLLETVEKSLAVLLLALAGITDPSAFSAPYYVVFIGLCT
WWACHFPISQLGFNTICVIVGFFTGGHMICLYIYQTPFIQQMFHPEQLWARLFGLHNIIS
HSNITDCTHDSLNQNLDWPVYVHPGILLLLYYSLLSILKLKSSDKKRISGCDLRKSQQED
MELTDIEPVSKEQYSAGEETKPMLQRMNTEEEAKPQDCTVHVIRRNSNQLPEELETKEPS
QFHLMIHVILSQSYICALIAMMVWSITYHSWLTFVLLLWACLIWMVRNRRQFAMLCSPFI
LMYGVTLCSLQYVWSMDLREELPTQLGFMKLSQLGLVRAPYPCLNMGALLLYTLTFWLLL
HQFVTEKFLKRKKFMSPLLEVTVADAGKEKNLLKRFGEQVKSFYAKYWIYVCGGMFIVVS
FAGRLVVYKIVYMLLFLLCLVLFQVYYSLWRKLLTFFWWLVVAYTMLVLITIYTFQFEEF
PEYWKNLTNLTDEQLGDIGLERFSVSELFTSILIPGFFLLACILQLHYFHRPFMHMTNLA
HASCQGSFHSHESEQPKEEEEKAGACSDAAADEEEDEEESAHGADLSKWDLVTQRLSVLS
FKFSELLHRLQVFLWRLLELHVLKLVALYSVWVALQEVSVMNFLFVVLWAFAMPFSRFQH
MASCLCTIWTSIIIVCKMLYQLTVVNPLEYSSNCTQPPLNNTSLLEDEILNSTLYREPID
PANWFGIRKGYPNLGYIQNHLQILLLLVFEAIVYRHQEFYRKQYQLEKPHIQAVFPDVYR
EHLDQGLFSCIKYFINYSFYKFGLEICFLLTVNVIGQRMNFMVIFHGCWLIVILTRRQRV
NIAKLWPKYCVFLIFFLLWQYMICLGIPPVLCIDYPWRWDTFVPVNSALIKWLYLPDFYT
TPKSVNLISDFVLLIGVAQQWKVFINEKKEEWYTMAGENVEEYEAPKDRPNPVPNFINCQ
SYLDMVKVAVFRYLFWFVLTVVFITGATRISVFGLGYLMSCFYLLLSGTTLLQKPMKAKL
VLWDCLILYNITVILSKNMLSLLSCVFVQQMQTNFCWVIQLFSLVCTVKGYYNPQDMDKD
RDCSLPVEEAGIIWDSICFLFLLLQRRVFLSCYFRHVVLDLRASSLQTSRGFELFMASIR
KNVFFHQESERRSLNQLRKQMERIRAKQERYHEGRRQTDSSQVKEGEPGSKKGSSRQKIH
WSRPWLDHASVLHSGDYFLFESDSEEDEESLLEQDQRPPKQSAFQLAYQAWVTSAKSALK
ERKSRQKERSGKVEMVTVENNEAGGGTESHTQEPREKGEDKDLNEERGGSNVVQRILDVL
KFLWVLLLAMVDGLINWLGTLTKQHVDMSTVLWVERYIITQKLSKGEDINRRDLEKVYET
GQDVREPRISSPPTDMSTSIASSGCEEEELICSTAECTENITQLSTGYNTRSNSLDSIRG
FPEIKPSHRSRTASELLLSRPLDFPELSESQHFFQSQSRILRLLLALYNFVAAHSELLCY
FIIILNNMVSASLISLFLPILIFLWGMLSIHKPSKRFWMTAIIFTEVMVVIKYLFQFGFF
PWNNYTILVRNEGKPFFPPRVLGLEKSDSYIKYDLIQLLMLFFHRSLLMSYGLWDRKDLD
LEERTPGKDKGSKTEIQASQDLEPAGGSSSSLRQRKRKESQGSVQERDSLKEKSLDVQKK
KKGRVALRVKIMGMKMQQFFACIVRNIYQPVKAFFHDILHTKNRAATDVYAFMFLADVVD
FVIIVFGFWAFGKHSAAADIASSLSDDQVPEAFLVMVLIQFSTMVIDRALYLRKTVLGKL
IFQVILVIGIHVWMFFILPAVTERMFNQNTVAQLWYFVKCIYFALSAYQIRCGYPTRILG
NFLTKKYNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWMCVEDIYANIFIIKC
SRETEKKYPQPKGQKKKKIVKYGMGGLIIVFLICIIWFPLLFMSLVRSVVGVVNHPIDVT
VTFKLGGYEPLFTMSAQQQSIQPFTPQQYEALTYEFERQPTAMQFITLYSYEDIVTARIE
GSSGSVWGISPPSREQMRKELQNGSSDITLRFTWDFQRDLAKGGTVEHTSEKHTKDLEPG
SQERMELADLLQGVRDTPVSIQHLFPKYIRAPNGPEANPVKQLQPDEEESYLDVEVQLNR
MRVAEGNSTSSFVEWWVITLKDCEGEDCNILPMVIFNDKVSPPSLGFLAGYGIMGLYVSI
VLVIGKFVRGFFSEISHSIMFEELPCVDRILKLCQDIYVVRERGELELEEELYAKLIFLY
RSPETMIKWTVDKD
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcaagtcctctgtggggtcctgttttggctccttctgcccggctccctcttg
gcagcctgcttattccgttacaactccttgtcactggtgtacctgttttatcttctgctt
ctgccatggtttgctggaccaaatccctgcagcatgagaggtcacacaggacgtctgatg
aaagcgttacttgctaccagcatcctcttcctctgtgctcatctcatcttccagatctgc
ctgtacacaatacctgaactggatgacctgctagggcacaactgcagcagctgggatgtg
ttggctcgtcacgtaggtataaacaggctggatctttctgatatccccaacatggtgcga
caagtgtccccagattttggcatgtttgtcgtgtcagcattgtgccttggcttgtgtaat
cgcctagtgaccaagaagagacgacagaggtcttcaggctattttgagcaggaagaagag
aggactgaacttaacctaaaatatgaaagtagagagtgtgatacagagtttgaggtgggg
ggagacttacattctgttccacgagaccgccttcttgggtcctggcttagaaaggcagca
tacaggcttctggaaacagtggagaaatcacttgctgtcttactcttggctcttgcaggt
atcactgatccctctgctttctcagccccatattatgtggttttcattggtctctgcaca
tggtgggcctgccattttcccattagccaactaggctttaatactatctgtgtcattgtt
gggttcttcactggaggtcacatgatttgcctttatatttaccagacaccttttatccaa
caaatgtttcatcctgaacagttatgggcaaggttgtttggtctgcataacatcatcagt
cactccaacattacagactgtacccatgactctctgaatcaaaaccttgactggcctgtg
tatgttcatcccggaatcttattactgctgtactactccctattatcaatactgaaactg
aagagctctgacaagaaaaggatttcagggtgtgaccttcggaaatctcagcaggaggat
atggagttgactgatattgagccagtttcaaaggagcaatatagtgcgggagaagagaca
aaaccaatgcttcagaggatgaacactgaagaagaggctaaaccccaagactgcactgtt
catgtgattagaagaaattctaatcaactgccagaagaacttgaaaccaaggagccatca
caatttcacctgatgattcatgtaatactgagccaaagctatatctgtgcgcttattgca
atgatggtgtggagcattacatatcacagctggctgacttttgtgctgctgctctgggca
tgtttaatctggatggtgaggaacaggcgccagtttgcaatgctgtgctctccctttatt
ttgatgtatggagtgactctctgcagcctgcagtatgtctggagtatggacttgagagaa
gagcttccgacacaacttggttttatgaagctgtcacagctgggactggttcgcgcacca
tacccctgccttaacatgggagcactgctactttacacgctgacattttggcttctgctg
caccaatttgtaacagaaaaatttctaaaacgtaagaagtttatgtccccactcctggag
gtcacagtggcagatgctggcaaagaaaagaacctgctaaaacgttttggggagcaagta
aaaagcttctatgcaaaatactggatctatgtgtgtggaggcatgtttattgtggtcagc
tttgctggtaggctggtagtttacaaaatagtctacatgcttctgttcctactatgcttg
gtgttatttcaggtgtattactctttgtggaggaagctgctgacttttttctggtggtta
gttgtagcatacacaatgttggttcttatcaccatctacacctttcaatttgaagagttt
cctgagtactggaaaaacttgaccaaccttacagatgagcagttgggtgatattgggctt
gagaggtttagtgtgtcggaactttttaccagcatccttatcccaggcttcttcctcctt
gcctgcatcctccagttacactactttcatcgcccttttatgcacatgaccaacttggca
catgcctcatgccaaggaagtttccatagccacgagagtgagcagccaaaggaagaagaa
gagaaagctggtgcatgcagtgatgctgctgctgatgaggaggaggatgaggaagaatct
gcacatggagctgatctaagtaaatgggacctagttacacagcgcctttctgtcctgtcc
tttaagttctctgagctgctgcaccgattacaggttttcctttggaggcttttggagctc
catgtgttgaaactggtggctttgtatagcgtgtgggttgccctgcaggaggtatctgtg
atgaatttcctttttgtggtcctatgggcttttgctatgcctttctcccgattccagcac
atggcttcctgtctttgcaccatctggacctctataattattgtttgcaaaatgctttac
cagcttactgttgtcaaccctctggagtactctagcaactgtactcagcctcctctaaat
aacaccagtctcctagaagacgagattttgaactccaccctttatagagaacctatagat
ccagcaaactggtttggtatcagaaaaggttatccaaacctaggttacatacagaatcac
ctgcaaatactcctacttttggtatttgaggcaattgtttatcggcatcaggagttttac
cgtaaacaataccagcttgagaagccacacattcaggctgtatttccagatgtctacaga
gagcacttggaccaaggcttgttcagctgtatcaaatattttatcaactattccttttat
aagtttggtcttgagatctgcttccttcttactgtgaatgtgattggtcagaggatgaac
tttatggtaatctttcatggctgctggctgatagtgattcttactcgacgacagcgagtc
aacattgcaaaattatggcctaaatactgtgtgttcctaatctttttcctgttgtggcag
tacatgatatgtctgggcattcctccggtgctttgtatagattatccctggaggtgggac
acatttgttcctgtcaactctgcactgataaagtggttatatcttccagatttctatact
acacctaaatctgtcaaccttatcagtgattttgttttgctgattggtgtggcccagcag
tggaaggtgtttattaatgagaagaaggaagaatggtacactatggcaggggaaaatgtg
gaagagtatgaagctccaaaagacaggcccaaccctgtacctaacttcatcaattgtcag
tcttatctggatatggtgaaagtagcagtgtttcggtacctattctggtttgtcttgact
gtggtctttataacaggggccactcgcatcagtgtttttggcctaggatatttgatgtcc
tgtttctaccttcttctgtctggcacaacccttctgcaaaagccaatgaaagccaagctg
gtgctttgggactgtttgatcctctacaacatcactgttatactgtccaagaacatgctg
tcgctcctgtcttgtgtatttgttcaacaaatgcaaaccaacttttgctgggtgatccag
ctcttcagcctagtttgcacagttaagggttactacaatccccaagatatggataaagac
cgggattgctctctgccagtggaagaggccggaatcatttgggatagcatctgcttctta
tttctccttctccaacgaagagtttttttgagttgctactttcggcatgttgttcttgac
cttcgtgcctcctcccttcaaacatcaagaggttttgagctcttcatggccagcatcaga
aagaatgtgtttttccaccaagaatctgagagacgatctcttaaccagctcaggaagcaa
atggagagaatccgagcaaagcaagaacgctatcatgaaggcagaagacaaactgatagc
agtcaagtaaaggaaggtgagcctggcagcaagaaagggtccagtaggcaaaagattcat
tggagccgcccatggttagaccacgcctcagtgctgcattcaggagattattttctgttc
gaatcagacagtgaagaggatgaagagtctttattggagcaggatcagaggccacccaag
cagagtgcttttcagcttgcataccaggcatgggttacaagtgccaaatctgcgctaaag
gaaagaaagagtcggcagaaagagagatctggaaaggtagaaatggtcacggtagagaat
aatgaagcaggaggggggacagagtctcatacccaggaaccaagggagaaaggagaggat
aaagatctgaatgaggagagaggaggaagcaatgtggtacagcgtatccttgacgtgttg
aagtttctctgggttcttttgcttgccatggtggatggactgatcaattggctaggaacc
cttacaaagcagcatgttgatatgtccacagtactgtgggtagagagatatatcataacc
caaaaactgtctaagggagaagatatcaaccgcagggatttggaaaaggtatatgagaca
gggcaggatgttagggagcctaggatttcatctcctccaactgatatgtcaactagcatt
gcttcaagtggctgtgaggaagaggagcttatctgcagcacagcagagtgtacggaaaat
ataacacaactcagcaccgggtacaacacacgaagtaacagcttggactctattaggggg
tttccggaaatcaagccaagtcatcgttctcgtactgctagtgaattgctgctttccagg
ccacttgatttcccagagctctccgagtctcagcacttctttcagtctcagagtcgtatt
ctgaggctcctgttggccctctataactttgtggctgctcactctgagctgctttgttac
ttcatcatcattctcaacaacatggtgagcgcttccctgatatcactgttccttccaatt
ctcatcttcctgtggggtatgctgtccatccacaaacccagtaagcgcttctggatgact
gctatcatttttactgaggttatggtagtaataaaatacctcttccagtttggtttcttc
ccatggaataattataccattctggtacgcaacgaagggaaaccattttttcctccacgt
gtcctgggacttgagaagagtgactcgtacatcaaatatgatctgatccagctcttgatg
ctctttttccatcgctcactgctcatgagttatggtctttgggatcgtaaagacttagac
cttgaagagagaacacccgggaaggataaagggagcaaaacagagattcaggcatcccag
gatctggagccagcaggaggcagtagctcttccctgcgtcagcgcaaaagaaaagaatcc
cagggcagtgtgcaagaaagagattccttaaaagagaaatcactagatgtgcagaagaag
aaaaaaggaagagtggctcttagggtgaagatcatgggaatgaaaatgcaacagttcttt
gcctgcatagtgcggaatatatatcagccagtgaaagcttttttccatgatattctacat
accaagaaccgtgctgcaacagatgtttatgccttcatgttcctcgcagatgtggttgac
tttgtgatcatcgtatttgggttttgggcttttggaaaacactctgctgctgccgacata
gcatcatctctctctgatgaccaagtaccagaagctttcctagtcatggtcctcatacag
ttttccaccatggtgatagatcgtgctctatacctgcggaagactgtgcttggaaagctc
atctttcaagttattctggtgattgggatacatgtctggatgttctttatcctaccagca
gtcacagaaaggatgttcaatcagaacactgtggcccagctctggtattttgttaagtgc
atttactttgccctgtctgcctaccagatccgctgtgggtatcctacccgcatcctgggc
aacttccttaccaagaaatacaaccacctcaacctattcctatttcaggggtttcgcttg
gttccgtttctagtagagctcagggctgtaatggactgggtttggactgataccaccttg
tccttgtccaactggatgtgcgtggaagacatttatgctaatatcttcattatcaaatgc
agccgagagactgaaaagaaataccctcagcctaaaggacagaaaaaaaagaagatagtg
aaatatggaatgggtggtttgatcatagtcttccttatctgtataatctggtttcccctt
ctcttcatgtcgttggtgcgctcagtggtgggagtcgtcaaccaccctatcgatgtcacg
gttacttttaaactcgggggttatgagcctttattcacgatgagtgcacagcaacagtcc
atccagccattcaccccacagcaatatgaagcgcttacctatgagtttgagagacagccg
actgccatgcagttcattactttgtatagttatgaggacatagtgactgcgcgaattgag
ggaagttcaggatctgtatggggaatcagccctccaagccgtgagcagatgagaaaggag
ctgcaaaatggatcctctgacattacactacgcttcacctgggattttcagagggatctg
gcaaaaggtggcactgtggagcacacatctgagaaacacactaaggacttggagcctggg
agccaggagaggatggagctggcagatcttcttcaaggagtacgagacacccctgtctct
atccagcacttgtttccaaagtacatccgcgctcctaatggcccagaagcaaatccagtg
aaacagctccagccagatgaagaagaaagttacctggatgtggaggtgcagctaaatcgg
atgcgagttgcagagggaaatagcaccagcagttttgtggagtggtgggttattactcta
aaagactgcgagggagaagactgcaacatactacctatggtgatttttaacgataaagtt
agccctcctagcttaggattcctggctggatatgggataatgggtttgtatgtatctatt
gtcctggtcattgggaagtttgtgcgcggcttcttcagtgaaatctctcactccatcatg
tttgaggagctgccttgtgtggatcggattctcaagctgtgccaggatatctatgtggtg
cgggagcgtggggaattggaactggaagaggaactctatgcaaaactcatcttcctgtat
cgctcaccagaaaccatgatcaagtggactgtagataaggattaa
DBGET
integrated database retrieval system
