Xenopus tropicalis (tropical clawed frog): 100489020
Help
Entry
100489020 CDS
T01011
Symbol
tap2
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
xtr04145
Phagosome
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100489020 (tap2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100489020 (tap2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100489020 (tap2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100489020 (tap2)
Enzymes [BR:
xtr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100489020 (tap2)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100489020 (tap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_25
AAA_16
DUF87
Motif
Other DBs
NCBI-GeneID:
100489020
NCBI-ProteinID:
XP_002942649
Xenbase:
XB-GENE-481680
UniProt:
A0A8J0QYQ9
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MRLFKTSSPFVLFMMASLSFSIILFMVDSFLNHFAAKLVYKYYPYEILGALWLLSLIKIP
VLAIVSLSLKCPVFVTSRLSFVLTLCLSIPLHQTLRLLLHSHVPEMHSSFPNSFPSHLPP
FLACLLWDLVSPNILPNKSAEGEANSKKRERENFIRLLKYSIPDWLPLCGAFVFLTLALI
GEMFIPYYMGRVIDILSTNYNEREFLRAMSFMAMFSITSSIFAGSRGGLFMFSLARLTQR
LRLLLFRSVIKQEIAFFEATKSGDITSRLTNDTARVSRSIAANVNITLRMLVKCVGVYSF
MFSLSWQLTLLTFISSPLTWIIQKVYNYYHQDLVKRVQDSIARSSELAKEIIESVRNVYS
FAAEEEEAKRYENSLQETHVLQTRRDFVTALYLLVTRLVNLGTQVTMLYYGQILIRSGFI
SSGKMVSFILYQMESDSYIRTLVHMLSEITHAAGAAEKVFQYLDREPQVSASGCLCPGTL
QGRFEFSNVTFSYPSRPEILALQNVSFTLPPGSVTALVGPSGGGKTTCVSLLERFYEPQG
GNILLDGKPLKEYKHEYLHSKVALVAQEPVLFAGSVRENISYGLYNIPEEKLKAAARKAK
AEDFIEGMEKAYDTDVGNSGAQLSAGQKQRVALARALARKPKLLILDEASSCLDAETEHE
IQKSLQSIEDLSLLIIAHRLRTVQKADQILVLEAGNLVEQGTHEKLVQKXRECITVSLVV
ALCKMVGN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcaaaacatcatctccctttgtgctttttatgatggcctccctcagtttt
tccataatcctttttatggtggattcttttcttaatcattttgctgcaaagcttgtctat
aaatattacccgtatgagatcctgggggctttgtggctgctgtccctcattaaaatccca
gtgctggccatagtgtctctgagtctgaagtgcccggtctttgtcacctctcgactctct
tttgttctgactctttgcctgtccatcccactgcaccaaacactcagactccttctccac
tctcatgtcccagaaatgcactccagctttccaaattctttcccgagtcacctgcctcct
ttccttgcttgcttgctctgggatcttgtctcccccaacatccttcctaataagtctgct
gaaggggaagcaaacagtaagaagagagagagagagaatttcatcaggcttctgaaatat
tccatacctgactggctgcccttgtgtggagcctttgtctttctaacactcgctctgatt
ggtgagatgtttattccctattacatgggtcgtgtgattgatatactatcaacaaattat
aatgaaagggagttcctgagggccatgtcctttatggccatgttttctattacaagctca
atctttgctggctctcgtggtggcctcttcatgttttcacttgctcgacttacacagcgc
ttacgtcttcttctgttccgctcggtcatcaaacaggagatcgctttctttgaagctact
aagtcaggggatattacatctcgactgaccaatgacacagcacgtgtgagccgctcaatt
gctgccaatgtgaacataactctgcgtatgctggtgaaatgcgttggggtgtatagcttc
atgttttccttatcatggcagctcactctcctgacatttatcagctcccccctcacctgg
atcatacagaaagtgtacaactactatcaccaggatctggtgaagagagttcaggattcc
attgcaagatctagtgagctggcgaaagagatcattgaatccgtaagaaacgtgtacagt
tttgctgcagaggaggaggaggcaaaaagatatgagaattctttgcaagagacccatgtg
ttgcagacacgcagagactttgtcacagctttgtacctgctggttaccaggcttgttaac
cttggcacccaggtcactatgttgtattatgggcagatcttaatccgcagtggctttatt
agtagtgggaaaatggtgtcatttatcctgtaccagatggagtctgacagctatattcgg
actctagttcacatgctcagtgaaatcactcacgcggctggagctgcagagaaggttttc
cagtatctggatcgggagccacaagtgtctgcatctggttgtctttgccctggaacacta
cagggaagatttgaatttagtaatgtcaccttttcatacccatctcgaccagagatttta
gcattacagaatgtttccttcaccctccctcctggcagtgttactgcccttgtgggccct
tcaggtggagggaagacaacctgtgtgtcactactagagaggttttatgaacctcaggga
ggaaatatcctgctggatgggaaacctctgaaggaatataaacatgaatacctgcacagc
aaggtagcattagtggctcaggagcctgttctgtttgctgggtcagtgagagaaaatatc
agttacggactatacaacattcctgaggaaaagttgaaagcagcagcaagaaaggcaaag
gcagaggacttcattgagggaatggaaaaagcatatgatacagatgtgggcaatagcggg
gctcagctaagcgcaggacagaagcagcgtgtggccttagcacgggctctggcaagaaaa
cccaagctactcattcttgatgaagcctccagttgtcttgatgctgaaactgaacatgag
atccagaagtctttgcagagtattgaggatctctctctgctgattatcgctcacagactg
cgcactgtacagaaggctgatcagattctagttcttgaggcagggaatttggtggagcaa
ggcacccatgagaaactagtacagaagnncagggagtgtatcaccgtctccttagtggta
gctctctgcaaaatggtgggaaattga
DBGET
integrated database retrieval system
