Xenopus tropicalis (tropical clawed frog): 100489047
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Entry
100489047 CDS
T01011
Symbol
ptcd2
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial isoform X1
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100489047 (ptcd2)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100489047 (ptcd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_2
PPR_1
PPR
Daxx
PPR_3
ANAPC3
Retinal
ARM_TT21_5th
DUF4327
Motif
Other DBs
NCBI-GeneID:
100489047
NCBI-ProteinID:
XP_002934867
Xenbase:
XB-GENE-985814
UniProt:
A0A6I8PKY4
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Position
1:182871370..182887854
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AA seq
382 aa
AA seq
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MALLGSWTAQRWLLENGGRSLLRAGAQLALCCSLQAKRYLLTDDILKLHEFQKKKLTTLY
QIYGKKDLYFQTIEEKLQRNGIILRDELKTLLHLCSTQPDVEFAKRVIYRYHEENKNVMF
GEFRFGPVFLRLCYELDLEDIAVELLKDKTLHGFFSDCTSFNILMDMLFTKGQYERAVEV
LVQMRNQRVRFSKETYILAFAICYKLNNPNSCKICTTLLEEIEMKGDHLPKQAACFAVAF
ALKQEEFVKARKLYSQIMNTDSKLCNNLLLLIKVHTSTVEDVLQFLEAAAQAMGSKFVKK
TEFAEELLAATGQKLKSHTELYTRFNIVYHRLKDAGQISGLTLDQMLCYTPPELTRSNLH
LIRNRKTSRRTFRSLQSTLLVE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgggctcctggactgcccaacggtggcttctggagaatggtggccgctcg
ctactccgtgctggggcccagctggctctgtgctgcagcctccaagctaaacgttacctc
ttaactgatgatatcttgaaacttcatgaatttcaaaagaagaaactgactactttatat
cagatttatgggaaaaaagatctttattttcaaacgatagaagaaaagctacagagaaat
ggaatcatcctacgagatgagctaaaaacattacttcatctatgtagcacgcagcctgat
gtggaatttgcaaagagggtaatctataggtaccatgaagaaaataaaaatgtaatgttt
ggagaattccgatttggccctgtttttctcagactgtgttatgagcttgatcttgaagat
atcgcagttgagcttttaaaagacaagactctacacggtttcttttctgattgcacctcc
tttaatatattgatggatatgctcttcaccaaagggcagtatgaaagagcagtggaagtg
ttagtgcaaatgcgaaatcagagggtgaggtttagcaaagagacctacattttggcattt
gctatatgttacaagctgaacaaccctaattcctgtaaaatttgcacaacacttctagaa
gaaatcgagatgaagggagatcatctcccgaagcaagcggcctgctttgctgtggctttt
gcgttaaaacaagaggaatttgtgaaagcacggaaactttactctcagatcatgaacact
gatagcaaactgtgcaataatttacttcttctcattaaggtgcacactagtaccgtggaa
gatgttctgcagtttctggaagctgcagcacaagccatgggctctaaatttgtgaagaaa
actgaatttgcagaggagctgttggccgccaccggacagaagctgaaatctcatactgaa
ctttacacaagatttaacattgtttatcacagacttaaagatgcagggcaaataagtgga
ttaacactggatcaaatgctgtgttatactccccctgaactcacacgctcaaacttgcat
ttaataagaaacaggaaaaccagccgcagaacatttcgatctctacaatctacactattg
gtggagtaa
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