Xenopus tropicalis (tropical clawed frog): 100489152
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Entry
100489152 CDS
T01011
Symbol
itga11
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04810
Regulation of actin cytoskeleton
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100489152 (itga11)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100489152 (itga11)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100489152 (itga11)
04810 Regulation of actin cytoskeleton
100489152 (itga11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100489152 (itga11)
Cell adhesion molecules [BR:
xtr04515
]
Integrins
Integrin alpha subunits
100489152 (itga11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Integrin_A_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
100489152
NCBI-ProteinID:
XP_017947982
Xenbase:
XB-GENE-483822
UniProt:
A0A6I8Q8C8
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All DBs
Position
3:complement(117715791..117767374)
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AA seq
1188 aa
AA seq
DB search
MDLCRRLMAAWALCLLPGLTDTFNIDTKRPRIISGSKDAFFGYTVQQHQIAGKKWLVVGA
PFDVNGPQKTGDIYKCSVTNDTSNDCTKLGIGRVTLSNVSERKDNMRLGMSLVTNPKDNS
FVACSPLWSHECGSSYYTTGMCSRVNSNFRFSRIVAPALQRCPTFMDIVIVLDGSNSIYP
WVEVQSFLISILQKFYIAPGQIQVGVLQYGETVVHEFYLNNYRSVTDVVEAAKRIEQRGG
TETRTALGIEKAVTEAFQRGGRKGAKKVMIVITDGESHDSPDLQRVIESSEKDNITRYAV
AVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDEAALKDIVDALGERIFSLEGGTN
KNETSFGLEMSQAGFSSHVVEDGILLGAVGAYDWNGAVLKETSSGKVIPRRESYLKEFPD
ELKNHGAYLGYTVTSVMTWQRVRIYVAGAPRFNHTGKVIVFTMHGAENMTIHQALQGNQI
GSYFGGEMDSVDVDGDGVTDILLVGAPMYFIDGWERGRVSVFVLRERQFIHNGFLQDLNS
SQNSRFGSSIAAVPDLNQDLYNDVVVGAPLEDNHKGAIYIFHGLRKNILKKYKQRISAAE
LAPGLVYFGCNIHGEMDMNEDGLVDLAVGSMGNAVLLWTRSVVKINATMHFEPPKINIFS
KDCHRNGREATCMSAFICFSPMFKAQQFQGQNVAIKYNVSIDERRYIPRAIIDDIGGDKH
FVKTIRATSGHNQCQQLNFHVLDTADYVKPITFSLEYELAFSDQGPVLEEDWPTSLKVSV
PFWNGCNQDERCVPDLYLDVKHDIPTALEYCQRFLYRTQSACTEFISAFDNSVFIIQRSR
RRVALEVVLENRGENAYSTALNISHSQNLQFASLITKEDSDIKIECKSDDRFPHTKTCNV
SYPFFRAKAKVAFRLDFEFSKYQFLPFLQVHLSAGSDSEEQESTRFDNEVLLDFHLKYES
DLLFTRHSSLNHYEITSEGSADRYNAIGPPFNSSFKIQNLGFFPEEINLKITVPVATRGG
NRLLFLHSLISDQENAVCNIWGNSTDYRRKPTEEDLSRVPQLNHSNSDVISIDCVLILAS
NQEASFILHGDLWSRSFRAMNFRSVNVVVFAALQRKFQSPFIFREEEPTRQITFAISKQE
EWEVPIWVIITSTLGGLLLLALLVLALWKLGFFKRSHHEREEENKDME
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtgtagaagacttatggctgcctgggctctgtgcctgctgccaggcctcacc
gacacattcaacatcgacaccaagagaccacggatcatttcgggctctaaggacgcattc
tttgggtacaccgtgcagcagcatcaaattgccggaaaaaaatggttggtggtgggtgcc
ccatttgatgtcaatggtccacagaagactggtgatatctacaaatgttcagtcaccaat
gatacttccaatgactgcaccaagcttggcatcggcagggtgactctgtccaatgtctcg
gagagaaaggataacatgcgcctgggaatgagtttagtcacaaaccccaaagataatagc
tttgtggcctgcagtcctctctggtcccatgagtgcggaagttcttattataccactggg
atgtgctccagagtcaactccaacttccgtttctccaggattgttgctcctgccctacag
aggtgccccactttcatggacattgttatcgtgttggacggatctaacagcatctatcct
tgggtggaggtgcaaagttttcttatcagcattctgcagaaattctacatcgctccaggg
caaatacaggttggtgtgttgcaatacggagagaccgtagtacacgaattttatctaaac
aactatcgctcagtaacagatgtggtagaggctgcaaaacgcattgagcaacgaggaggg
acggaaacacgcactgcgctggggattgaaaaagcagtcacagaagcattccagcgtgga
ggtagaaagggagccaaaaaagtcatgatcgttattacagatggagaatcacacgacagc
cccgacctacagagagtgatagagagcagcgaaaaagacaatataacgcgttatgcagta
gcggttttagggtactataacagacgagggatcaatccagaagcgttcctaaatgagatc
aagtacattgctagtgaccctgatgataagcacttcttcaatgtgacagatgaggctgct
ctgaaggatattgtggatgcacttggggagagaatattcagtctggaaggaggtacgaat
aaaaatgagacatcctttggtttagaaatgtcccaggcaggattttcatcacatgttgtg
gaggatggtatattgcttggtgcagttggcgcttatgattggaatggagctgtgctgaaa
gagaccagctctggaaaagtgatacctcgtagagaatcctacctgaaagagtttcctgat
gaactcaagaaccatggcgcttaccttggttacacagtcacctccgtgatgacatggcag
cgggtcaggatctacgttgcgggggctccacggttcaaccacacagggaaagtgattgtc
ttcactatgcatggggcagagaacatgaccatacaccaggcccttcaaggaaatcagatc
ggatcctactttggtggtgagatggattctgtggatgtagatggtgacggtgttactgat
atactgttggttggagcaccaatgtactttattgatggatgggagaggggccgggtgtca
gtcttcgttttaagagagagacaattcattcacaatggattcctgcaagacttaaacagc
tcccagaattcacgctttgggtcctccattgccgcagtaccagacctcaaccaggacctt
tacaatgatgttgtggttggggctcctcttgaggataatcacaagggggccatttatatc
ttccatggtttgagaaaaaacattctaaagaagtacaaacagcgtatctccgctgctgag
ttggctccaggtctggtctattttggctgcaatatccacggggaaatggatatgaatgaa
gatgggctggtggacctggcagtaggatccatgggaaatgctgtcctgctgtggacacgc
agtgttgtgaagataaatgccactatgcactttgaacctccaaagatcaacattttcagc
aaggactgccacaggaatgggcgggaggccacctgcatgtcggcctttatatgtttctcc
cccatgtttaaagctcagcagttccaaggacaaaatgttgccatcaagtacaatgtgagc
atagatgaacggaggtacatcccccgtgctataattgatgacatcggaggagacaaacat
tttgtgaaaaccatcagagccaccagcgggcacaaccagtgccaacagctcaacttccat
gttctggatacagctgactatgtgaaacccataaccttttccctggagtatgagttggca
ttttcagaccaaggccctgtgttagaggaagactggcctacatctctaaaagtttcggtt
ccattctggaacggatgtaaccaggatgagcgatgtgtgcccgatctctaccttgatgtg
aaacatgatatccctacagcactggagtactgccagcgtttcctctacagaacccaatca
gcctgtacagaatttattagtgcctttgacaattcagtcttcatcatccagcgcagtagg
aggcgggtggcactagaagtggtgttggaaaacagaggggagaatgcgtacagcaccgcg
ctcaacatctcccactcccagaacctccagtttgccagtctgattacaaaggaggattct
gatattaaaattgaatgtaagagtgatgacagatttccacatacgaagacctgtaatgtc
agctatccttttttcagggctaaggcaaaggtggcattcaggttggactttgaatttagc
aaatatcagttcctcccctttctgcaagtccatctctcggcaggcagtgacagcgaagaa
caagagagtacaaggtttgacaacgaggttctgttggacttccacttgaaatatgaatcg
gaccttctgtttaccagacactcaagtctgaatcattatgaaataacctcagagggatct
gcagacagatacaatgcaattgggcctccattcaacagctcattcaagatccagaacttg
ggcttcttcccagaggagattaaccttaagatcactgtgccggttgcaacccgtggaggg
aaccggctgctcttcttgcacagcctaataagtgaccaggagaatgcagtctgcaacatt
tggggcaacagcacagactaccgcaggaagccaacggaagaggacctgagccgtgtacct
cagctgaaccacagtaattctgatgtgatatccattgactgtgtgctaatcctggcatcc
aatcaggaggcatcctttatcctgcatggagacctctggagccgatcattcagagcgatg
aatttccgatctgtgaatgtggttgtgtttgctgcattacagcgcaagttccaaagcccc
ttcatcttccgagaagaagagcccacccgccagattacatttgctatttccaagcaggaa
gaatgggaggtgcctatctgggtcataattaccagcacgttaggagggctcctgctctta
gcccttctggttctggctctttggaagctggggttctttaaacgcagccaccatgagagg
gaggaagagaacaaggatatggagtaa
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