Xenopus tropicalis (tropical clawed frog): 100489161
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Entry
100489161 CDS
T01011
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100489161 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100489161 (lama4)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
Laminin_II
EGF_LMN_ATRN
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
100489161
NCBI-ProteinID:
XP_002936983
Xenbase:
XB-GENE-1004770
UniProt:
A0A6I8SML1
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All DBs
Position
5:76549047..76638157
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AA seq
1913 aa
AA seq
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MAHFSPWYFICMLMSLWRYLCVCSGSMEGSAFHLDSEGSTSIPSGQDMVQLQHVYIPARL
VPPAQRCHMGFYYSVSGECLPCNCNGNAQKCLDGSGECLDCQRNTTGKQCDRCPPGYLGN
VVRGVPKSCLPCPCPLPFSPNNFAIACGVKSGSVRCICKDNYAGPNCERCAPGYYGNPLL
KGSTCKKCDCSGNSDPNLIFEDCNELTGQCNNCMRNTTGFNCERCALGYYGDARVAKNCK
ECRCSKCGTETCNDITGTCQCKPGVTGVFCDHCEAGYYGYTSCLGCQKCMCSPASLDNNC
DPETRQCNCKPGAGGLKCERCKPGYWNYGPSGCQKCDCGDGPCNNKTGECLLEDPESPSS
SDCSFDCDKCIWDLIDDLRIAALLGDETKTTALNISTGVAAHKHLNYINSTLFHLTEMLE
DKNNQSIFTDLMIDNAESKVEALQTKVNELADKGNLAEMKGSRFHKETMETMKRAKMTAG
QVNDIEDGIQELLGKLEYYESLQGDLSAADRVKSVKQAEQMLKEMEELDFSTQRIALEEE
EEYVEELLREILDEWQQVQNNTRSLLPNVLEKIAEHDDELADLYEALEEARHDINQTREK
NKANIAKLHMSNIQTVKLTKEVENVSETLTQANITLNGTHMLISDISDITKNMSGHHAEV
DGAYTGLKERLENLSRNVENIVEEAVAHSLTLQREASGLTSDLKGIDANGFVQKAIDASN
VHESIVNMIEAANETSFIALSTAERVIDATDGMDNQIKYQMTESEKLLVQAKELKGASDS
SKDLGISETKQHVNSATLRKDALSDKIENAISQIEVHEDENTRKRLEKSKLDAEEALNIT
AIISKVTDPMSKNAKIWSENLSNTDFDASAYNKVVNSAGEAVRNLTEVVPLLLNKLRTVD
YKWPTNNISSSILRIRELIAQTRSVASKVQVSMRFGGKSAVDVNLKTNAADLNAFSSISL
YLNPIAHQEKPHDKFIMYFGNKNSTSDYMGLAIKSNNLVYVYNLGSGDVEIPLDSKPVNS
WPGYFSLIKIERLGRHGKVLLTVPSPSSTAEEKFIKKGEATGRDSVLDLDPSSMVFYVGG
VPSGFQLPASLDLPGFVGCLELSTVNDDVVSLYNFKNIYNLNTATAPPCARNKLAFTQSR
AASYFFDGTGYAVIRNMERRGRFTQVTRFDIEVRTPVDNALIFLMVNGTKFFSMELQDGY
LRLHYDFGFAKGPVLLEDSAKKFQVNDARYHEISVIYHNSKKMILVVDRRHVKSVDNEKT
SIPFSDIYIGGAPSLVLQSVKSHLGADIAFKGCIKGFQFQKKDFNLLEEPDTLGISYGCP
EESLMSRRAYFNGQSFIASSQKLAPFDSFEGGFSFKTLQPSGLLLYHSEGADVFSVSMDK
GSVVLRIKDIKVQSKNRKYSDGQSHFVVASVSPTRYQLLVDETDASVQDRQKPGASSLVA
RTFYFGGTPVGISQANFTGCISNAYFTRVDRDVEVEDFQKYTEKVQSSLYGCPVESPPVA
LFQKNGKNSSKDKGKLRKSVGMDKTLESHAAFGSKETEEDSEEVTLCSLSSRPKAARQAH
LYGGIANSRQEFNHIPNGFNEKSELFVRLKTHSSNGMIFYVSDKEEDNFMTLFLSHGRLT
FMFNNGQQKLRIKSQEKYNDGLWHSVLCIREKNKGRLIINGLRVLEDSISAAAVTWTVDA
PFYLGGVAPGRAIKNVQINSAYSFNGCLSNLQLNGRALTSPSQTFSVTPCFEGPMESGTY
ISSEGGYVILDDSFSTGLTFEFALEVRPRNNSGVLIHIQNVNGEYLNLHMKQGQVIVKVK
NGNREFSTRVIPKQSICDGQWHRIAVIRDGNVVQLDVDSEINHVVGPINTKVLDLKEPVF
VGGVPGSLLGPTLTTRNSFTGCIRNFVIDERAVSFNKASLVSGAVSINSCPAA
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggctcacttttccccgtggtattttatatgcatgttaatgtcactatggaggtatctc
tgcgtctgcagtggctctatggaaggtagcgctttccatttggactctgaaggcagcact
tccatccccagcgggcaggacatggtgcagctgcagcacgtttatatccctgccaggctg
gtgccaccggcacagagatgccatatgggattttattattcagtgtctggagaatgttta
ccctgtaattgcaatggaaatgcacagaagtgcttggatggatctggagaatgtttggac
tgccaaaggaatacaacaggcaaacaatgtgatagatgtcctccaggttatcttggaaat
gtggtccgaggagtacccaaatcttgcctgccatgtccttgccctttaccatttagccct
aacaattttgctattgcttgtggtgtcaagagtggttctgtgcgctgtatctgcaaggat
aattatgctggaccaaactgtgaaaggtgcgccccaggttattatggaaatcctcttcta
aagggaagtacatgtaaaaaatgtgactgcagtgggaactcagaccctaacctgatattt
gaagactgcaatgagttgacaggacaatgtaataattgtatgcgcaacaccactggtttt
aactgtgaacgatgtgcgctggggtattatggagatgccagagttgctaaaaactgcaaa
gagtgtcgatgctcaaagtgtggtacagaaacatgcaatgatattactgggacatgtcag
tgcaaaccaggagtcacaggcgttttctgtgatcattgtgaagctgggtactatggttat
accagttgcttgggctgtcagaaatgtatgtgcagcccagcttccttggataacaactgt
gatcccgaaacacgacaatgtaattgtaagcctggcgcaggaggtctgaaatgtgagagg
tgcaagccaggatactggaattatggaccatctggatgtcagaaatgtgattgtggagat
ggcccatgtaacaataaaactggggaatgtttgttagaggacccagaatccccatcaagt
tcagactgttcatttgattgtgataagtgtatatgggacttaattgatgacctcagaata
gctgcattgttaggagatgaaacaaagactacagcacttaatatatcaactggtgttgcg
gctcacaaacatctaaattacatcaattccacgttgttccatcttacggaaatgttggag
gacaagaacaatcagtcaatatttacagatctaatgattgataatgcagaaagtaaagtg
gaagctcttcagaccaaagtaaatgagcttgcagacaaaggaaatctagctgagatgaaa
ggatctcggtttcacaaagaaaccatggaaaccatgaaacgggctaagatgactgcagga
caagtaaatgatatagaagatggcatccaagaactacttggcaaattagagtattatgaa
tcattgcaaggagacctgagcgctgctgatcgtgttaaaagtgtgaaacaagcagagcaa
atgcttaaggaaatggaagaactggacttcagtacacaaaggattgcactagaagaagag
gaagaatatgttgaggagttgctgcgtgaaatcctagatgaatggcagcaagtacaaaac
aatacccgatctcttctccctaacgtactagagaaaattgcagaacatgatgatgagctt
gcagatctgtatgaagcactggaggaagcacgccatgacatcaaccaaaccagagaaaaa
aataaggcaaacattgccaagcttcatatgtctaatattcaaacagtaaagctgactaaa
gaagtggaaaatgtcagtgaaacattgacacaagccaacataacattgaatggcacacac
atgctcatttccgatatcagcgatattaccaagaacatgtctgggcatcatgctgaagtt
gatggagcttacacaggactaaaagaaagacttgaaaatttgtctcgcaatgttgaaaac
atagttgaagaagctgtcgctcactcactaacccttcaaagagaagcatctggactaacc
agtgacttaaagggaattgatgcaaatggatttgttcaaaaagccattgatgcctccaat
gtccatgagagcattgttaatatgattgaagctgccaatgagacatcttttattgcactg
agtacagcagaaagagttattgatgctacagatggaatggacaaccagataaagtatcag
atgacagagagtgagaaactgttggttcaagctaaagaactgaagggggcatctgattca
agtaaagacttaggaatttcagaaactaaacaacatgtaaactctgctactctgagaaag
gatgctttaagtgataaaatagaaaatgccatttctcaaattgaagtacatgaagatgag
aacacaaggaagcgactagaaaaatctaaactggatgctgaggaagccttaaacatcaca
gctataatatcaaaagtgaccgatccaatgtccaaaaatgccaagatttggagtgaaaat
cttagtaatacagattttgatgcttctgcttataacaaggttgtaaactcagcaggagaa
gctgtgaggaacctcacagaggtggtccccttgcttctaaataagttgcgcacagtagac
tacaagtggcctacaaacaatatctcatccagcattctccgcattagagaacttatagca
cagacaaggagtgtggccagtaaggtccaagtgtcaatgaggtttggaggtaaatcggct
gttgatgtcaatttaaaaacaaatgcggcagacctgaatgcattttcttctatcagctta
tacctaaaccccattgcacatcaggaaaaacctcatgacaaattcataatgtattttgga
aataagaattctacatcggactacatgggtcttgcaattaaaagcaacaatctggtatat
gtgtacaatctgggaagtggagatgttgagattccactggactccaagcctgtcaactcc
tggccaggatattttagtctcatcaaaattgaaaggctgggccgacacggcaaagtgctt
ttaactgtacctagtccaagtagcacagcagaagaaaaatttatcaaaaagggtgaggct
actggaagagattctgttctagatctagatcctagcagcatggtgttttatgttggtggc
gttccttcaggatttcagcttcctgccagcttagatctgccaggctttgttggttgtcta
gagctttctactgtcaatgatgatgttgttagcttgtacaatttcaagaacatctacaac
ttgaacacggccacagcaccaccatgtgccagaaataaattggccttcacacagagccgt
gcagcaagctatttctttgatggcactggatatgctgttatacgcaacatggaaaggagg
ggtcgctttacgcaagtcactcgctttgatatagaagtccgaacaccagtagataatgcc
cttattttcctgatggttaatggaaccaaattctttagtatggaactccaagatggttat
ctgagactgcactatgattttggatttgccaagggacctgtgcttcttgaagattcagca
aagaaattccaggttaatgatgcaagatatcatgagatctcagtcatttatcacaattcc
aagaagatgatattggtggttgacagaagacatgtaaagagcgttgacaatgaaaagaca
tcaattcctttctctgacatttatattggaggagcaccttctctagttttgcagagtgtg
aagagtcacctaggtgcagacattgccttcaagggatgtataaaaggtttccagtttcag
aagaaggatttcaatttgctggaagaaccagacacacttggtatcagctatggctgtcct
gaagaatcacttatgtcccgccgagcttattttaacggtcagagttttattgcttctagt
cagaagctggctcctttcgactcctttgaaggtggctttagtttcaaaactttacagcct
agtggcctgttgctttatcactctgaaggggccgatgtattttcagtatccatggataaa
ggatcggtagtcttaagaataaaagacatcaaagtgcagtctaaaaataggaaatacagt
gatgggcaaagccactttgttgttgcatcagtctccccaacaaggtatcagctgctggta
gatgaaacagatgcaagtgtccaagataggcagaaacctggtgcaagctcactggtggca
agaacattttactttggaggcaccccagtgggaatttcccaggccaatttcacagggtgt
atcagcaatgcttatttcacaagagttgacagagatgttgaagttgaggatttccagaaa
tacacagagaaagtccagtcttctctttatgggtgtccagttgaatcgcctcctgttgct
ctgtttcaaaagaatggtaaaaattcttctaaagacaaaggaaaactaaggaagagtgtt
ggaatggacaaaacattagaatctcatgctgcatttgggtccaaagagacagaagaagac
tcagaagaagtcaccctgtgctctctgtctagcaggccaaaggctgccagacaggcacat
ctctatggtggcatagcaaacagccgtcaggaattcaaccacatccctaatggtttcaat
gaaaagtctgaattgtttgtaagactaaagactcactcatccaatggaatgatcttttat
gtctctgataaagaggaagacaattttatgactctctttctgtctcatggccggctcacc
tttatgttcaacaatggccagcaaaagctaaggatcaagtctcaagaaaagtacaatgat
ggcttgtggcacagtgtgttatgcattagagaaaagaacaaaggaagattaataattaat
gggctccgagtattagaagacagtatttctgctgctgctgttacatggacagtggatgcg
ccattttatctaggaggtgtagcacctggaagagcaatcaagaatgttcagatcaattca
gcgtacagtttcaatggctgtctcagcaatttgcagttgaatggacgcgctttgacgtca
ccttcccagacattcagtgtaacaccttgttttgaaggccccatggaatctgggacctac
atttcatcagaaggaggatatgtgattcttgatgactccttcagtactgggttaacgttt
gagtttgcccttgaagtccggccacgaaacaactccggagttttgattcatattcaaaat
gtgaatggagagtatttgaatttgcacatgaaacagggacaggttattgtaaaggtgaaa
aacggcaaccgagaattttctacacgtgtcataccaaaacagagtatctgtgatggccag
tggcaccgaattgcagtgataagggatggaaacgtagtgcaactggatgtggattctgaa
ataaaccatgtagtgggccccattaacaccaaggtgctggatcttaaagagcctgtgttt
gttggaggtgtacctggttctctactcggacctacactgactacacgcaactcttttact
ggctgtatccgtaactttgtgatagacgaacgtgctgtaagcttcaataaagcatctctc
gtcagtggggcagtgagcatcaattcatgccctgcagcttaa
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