Xenopus tropicalis (tropical clawed frog): 100489162
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Entry
100489162 CDS
T01011
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04382
Cornified envelope formation
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100489162 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100489162 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100489162 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
GLE1
Motif
Other DBs
NCBI-GeneID:
100489162
NCBI-ProteinID:
XP_002937413
Xenbase:
XB-GENE-990048
UniProt:
A0A6I8Q9Q7
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Position
4:complement(100003616..100028620)
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AA seq
1172 aa
AA seq
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MDLWGYLTRILTFTLVLAVVTETHGREVCNCNGRSQQCVFDPDLLAQTGSGFRCINCNGG
TDGPHCEHCIEGYYPQPDGTCGPCLCHTVGSLNQQCDNNGQCRCKPGVMGSKCDQCQPGF
HSLSDTGCRRDGCQCEAAGSSGSCDAGGRCVCKPTVTGERCDRCKPGYYHLDGSRPEGCL
QCFCHGHSATCSSSSLHSVHKIISSFQKDTEGWSSVQRDGSTAPVPLRMSRHQKEVYIAS
RQQEPLYFNAPAQFLGDQSLSYGQALSISFRVDRGRYRAGTEDLVLEGNGLRVTATLTSS
KNSLPCRIPQTYTFRLDELSRSPWTPHLSHFDFRRLLRNVTSIHIRATYGEYSTGYLQNV
TLISARPVQGEPAPWVEQCVCPSGYQGQFCERCARGYRRESPGLGALSSCVSCNCPGGGH
CDPDTGDCYSGDENQNNDCADCPQGQYNDPRDPMSCLPCPCSAGIGCSLSPETQEPVCDE
CPVGLNGPRCEICAEGYFGDPQGERGAPRPCRPCQCNNNIDRSVEGSCDRVTGECLKCIH
NTAGYYCDLCKDGFFGNPLATAPELKCKACYCHPVGTVHQGCQKDGSCQCKTGFEGRSCD
QPQCPDCYSQVSTKLNLYKRQLLKLTGENNGQSPARGELEERMRKAEAAAQGLQRDSEAA
NGAALSLQRQFSGLQGTQSDTQNVLDQAKEKLQGLQTQKNQYQGQLQDMGRKINIALQQL
QGSQEELNRMTFPSTNLPLDSGSYSKLRQEAQEIANRLAQEAQTVAQDAAEAQGDTERAL
QILRTGGADPETADKLKARMEEARTQARSLETEAIQAAAAAERAHHDSMQTARAFGQLPP
ITSVAFQAELERLKGESTALKTNVDADLAQSKALQRKFTTWEQDAEQQLQEGQQNRLLAD
QLLSRANAAKTKATQAMNTGNATFYEIDGILMSLKGFGDQVGDRRSEAEDAMRRLPEIRL
RVQDATDSTKRTETALKGAASDASRAEGNAREANNIASEIQLNMLQMSQDANNSAEMALA
LERDLAEIRRLAIDTGASLDGKNQAAERDSAVADEVARKALEAEASALGVHDAVTATLST
LDRMLHILDQPLNINEEGLKALEASMGAARTQLNGRLKPAVQDLELAAQLQKQNMITVEK
EISQTLIDIQNLRDIRDNLPPGCYSTTAIEKP
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtgggggtacctgacccggatcctgaccttcacgctggtcctggcagtggtg
acagagacacatggcagagaagtctgcaattgtaatggccgctcccagcagtgtgtgttt
gacccagatttgctggcacagactggttctggatttcgatgtattaactgcaatggtgga
actgatggtccccactgtgaacactgcattgaggggtactacccacaaccagacggcaca
tgtgggccatgcctttgccacactgtaggctcgctgaaccagcaatgtgataacaatggg
cagtgccgctgtaaaccaggggtgatgggtagcaaatgtgaccagtgtcagcctggattc
cactctctcagtgacacaggatgcaggagagatggctgtcagtgtgaggctgcaggtagc
agcggatcatgtgatgctggagggagatgcgtgtgcaaacccactgtgacaggagagaga
tgtgacaggtgtaaaccaggatattatcacctagatggctcgcggccagaagggtgctta
cagtgtttctgccatggccactctgccacttgcagcagttccagcctccacagtgtacat
aagattatttcttccttccagaaagacaccgagggctggagctcagttcaaagagatgga
tccacagcaccggtacccttgcgcatgtcccgtcaccagaaggaagtctacatagcatca
agacaacaagagcctctgtattttaatgctcctgcacagttcctaggagaccagtctctg
agttatgggcaagctctctccataagctttcgggtggatcgcgggcgataccgtgcagga
actgaagatttggtcttagagggaaatggtctgagagttacagctacactaacgtcttct
aaaaattcactcccctgcagaataccccaaacctacacatttagactggatgaactttcc
agaagtccttggactccgcatctcagccactttgactttcgacgacttttgcgcaatgtg
acttcaattcacatccgtgccacatatggagaatacagcacaggatacttgcaaaatgtt
actctaatatcagcacgaccagtacaaggggagccggctccatgggtagaacagtgtgtt
tgcccctctggttaccaaggacagttttgtgagagatgtgcccggggataccgcagagaa
tctccaggtcttggtgctctgagctcatgtgtttcctgcaactgtccgggtggaggacat
tgtgatccagatactggtgactgttactctggagatgagaatcagaataatgattgtgct
gactgccctcagggtcagtataatgatcctcgggaccccatgagctgtttgccttgtcca
tgcagtgctggtattgggtgttcattgtctccagaaactcaggagcctgtatgtgatgaa
tgtcccgtggggctaaatggcccccgctgtgagatctgtgcagaaggctattttggagac
ccccagggtgaacgaggagctccgcgcccctgcaggccctgccagtgcaataacaatatt
gaccggtcagtggaaggcagctgtgacagagtgactggcgagtgcctgaaatgtatccac
aatacagctgggtattactgcgacctatgcaaggatggattctttggcaaccccttagca
acagctccagaactcaaatgcaaagcctgctattgccacccagtggggactgtgcaccaa
ggatgtcagaaagatggttcctgtcagtgtaaaactggctttgagggaaggagttgtgat
cagccccagtgccccgactgttacagtcaggttagcaccaagctgaatctgtacaagagg
caactccttaaacttactggagaaaataatggtcagtccccagccaggggagagctggag
gagagaatgaggaaggcagaggcagcagcacaaggcctgcagagagactcagaggctgct
aatggtgcagcactgtcattgcagaggcaattctcaggtcttcagggcacgcagtctgat
acccagaatgtgctggatcaggcaaaggaaaagctacaagggctacagacccagaagaac
cagtaccaggggcagctacaggacatggggaggaagattaatattgcattgcagcagtta
caaggcagccaagaagagctgaaccgcatgacattcccttctacaaatttaccattggac
tctggctcctattctaagctcagacaagaagcccaggaaatagcaaacagactcgcacag
gaggcccagactgtggcacaagatgcagcagaagcacagggagatactgagagggcgcta
cagattctacgcacaggtggggctgaccccgagactgcagacaagctgaaagcaaggatg
gaggaggcccgcacacaggccagatctctagaaactgaggctatacaggctgcagcagca
gcagagagagcccaccatgacagcatgcaaacagctcgggcctttgggcaactgcccccc
atcacctctgtggcattccaggcagaactggagcggctgaagggggaatccacggcactt
aaaaccaatgtggatgcagatctggcccaaagcaaagctcttcagaggaaatttactaca
tgggaacaagatgcagagcagcagctccaggaaggacagcagaacagattgttggcagac
caattgctctcaagggcaaatgccgccaagaccaaggcaacacaagcaatgaacactgga
aatgcaacattctatgagattgatggaatcctcatgagcctaaaggggtttggtgaccaa
gttggggaccgtcgcagtgaagctgaagatgcaatgcgtcgcctcccagagatccggctt
agggttcaggatgcaacagatagcacaaaaagaacagagacagccctgaaaggagcagcg
agtgatgcgagtagagcagagggcaatgccagagaggcaaataatattgcctccgaaata
cagctgaacatgctacagatgagccaggatgctaacaattcagcagagatggctctggct
ttggagcgggatcttgctgagatacgtagactggcaatagacactggtgcatctctggat
ggtaagaatcaggcagcggaaagggacagtgccgttgcagatgaggttgcaaggaaagca
ttggaagctgaagccagcgccctgggagtccatgatgctgtaactgcaactcttagtacc
ttggatcggatgcttcatatattggatcagccactgaacataaatgaagagggtctaaaa
gctctggaagccagcatgggggctgctcgcactcagctaaatgggcgtctcaagcccgct
gtgcaagatttggagctggcagcacagctacagaaacaaaatatgatcacagtagaaaaa
gagatcagccaaaccttgattgatattcagaacttacgtgacattcgggataacctacca
cctggctgttatagtacaactgctattgagaagccttga
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integrated database retrieval system
