Xenopus tropicalis (tropical clawed frog): 100489238
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Entry
100489238 CDS
T01011
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like isoform X2
KO
K09228
KRAB domain-containing zinc finger protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100489238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100489238
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100489238
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
Zn-ribbon_8
zf-C2H2_11
zf-C2H2_5
zf-met
Motif
Other DBs
NCBI-GeneID:
100489238
NCBI-ProteinID:
XP_002931798
Xenbase:
XB-GENE-1010453
UniProt:
A0A8J0QL57
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All DBs
Position
6:5905079..5914191
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AA seq
834 aa
AA seq
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MDKRRLTSDTQDSRLLSFPVVRLERIKNDSGKYQPISEELQKMEQRKMSGLPQRSPVVLL
ERIKVYSLNKYSEDLRWELNGPQMKNKEERRRLSAAGYRLDTYESGITEMNRERREGLGA
RKQTGSDTNRKSSTCNGFVARSAHSNQPLVLQKPHAQEMNSAPKAQQNQMPQLCTVTGGK
LIVTPKLTKHTQPDAEEKLHGSQKKINIISGKNLKPRKTLAQSTKQTVFPKPFGVINPFA
CVKCKRRFGSNGNLLIHQRIHTERPFSCTDCGKCFSHRTILREHRRAHMGKGPFPHSTGG
NKIPSGKGNFQRHQGASAKGKPLTCTECGKSFKHKSYLLIHERTHTGEKPYVCTQCGKGF
SQKVHLETHSLSHSTEKPFSCTECGKCFRLKQHLKIHEKTHTGVKDFVCTECGKRFIQKH
SLRQHQRIHTGEKPFVCNVCGKGHSRNEHLKAHLRVHTEDKPFACTECNKTFRSDRWLHA
HKLTHTGVKPFKCKECDQSFTTNGDLTKHSLIHSTEKPFICPECGKCFRIKSNLKSHEKT
HTGIIDFACTECGKRFTDKRSLHHHLMIHTGERPFVCSECGKSYRQKKSLNIHLRVHTGE
KPFACTECNKTFRLRRGLDIHKQTHTGLKRFQCNECGKSVSTKSDLNTHHRTHTGEKPYP
CSKCGKSFSTKKSLHQHGHTHTGIKPYACTECGKCFRNKADLKCHQSAHTGEKPFQCTEC
GKSFPSQTVLNIHQKIHTGGKPFQCTECDKCFCYRQALTAHQRIHTGIKAFGCTECGKQF
LAKYSLQRHLMIHTGEKPFVCTECGKSYRHKRNLNIHMNSHTGDKPSASRDCGK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaggcgacttaccagtgatacccaggattcccggctgctcagtttcccagta
gttagactggaaaggataaagaatgattctgggaaatatcagccaatatctgaagaattg
cagaagatggagcaaaggaaaatgagtggccttccccagagatccccagtggttctgttg
gagaggataaaagtttattctctgaataaatattctgaagatcttcgatgggaactgaat
ggccctcagatgaagaacaaggaggagaggaggagactcagtgctgctggatacagactg
gatacttatgaatcaggaatcacagagatgaacagggagaggagagaagggcttggtgca
aggaagcagacaggaagtgacacaaacaggaagtcctctacatgcaatggctttgttgcc
agatctgcccacagtaaccaacctctggtgcttcagaaacctcacgcccaggagatgaat
tctgccccaaaagcccaacagaaccaaatgccccaactttgcacagtaactggggggaag
ctgattgtaacccccaaattaacaaaacacacacagcctgatgctgaggaaaagctacat
ggaagtcagaaaaagataaacattatttcagggaaaaacctaaagccaagaaagacatta
gcccaaagcacaaagcaaactgtgttccctaaaccatttggggttataaatccgtttgcc
tgtgttaagtgcaagagaaggttcggcagcaatgggaacctcctcatccatcagcgcatt
cacacagagagaccgttctcttgcactgattgtgggaaatgtttctcccacagaaccatc
ctccgagagcaccgccgggctcatatgggaaaggggcccttcccccacagcactgggggc
aataaaatcccatcaggtaagggcaactttcagaggcaccaaggggcgagtgctaaaggg
aaaccacttacctgcactgagtgtgggaaatcattcaaacacaaatcttatttgctcata
catgaacgcacacacaccggggagaaaccttatgtttgtacccaatgtggtaaaggcttt
tcccagaaggtgcatcttgaaacacattcacttagtcattctacagagaaaccttttagc
tgcacagagtgtgggaaatgtttccgtttgaagcaacatctcaaaattcacgagaagact
cacactggggttaaagattttgtctgtacagagtgtgggaaacggttcattcaaaaacac
agcctccgccaacaccagcggattcacactggtgagaaaccatttgtgtgtaatgtgtgt
gggaaaggccacagtcgaaatgagcatctaaaagctcatctgcgagttcacacagaagat
aaaccctttgcctgcacagagtgcaataaaaccttccgatcagatcgttggctccatgcc
cacaaactgactcacactggtgtgaagccttttaagtgcaaagagtgtgatcaatccttc
acaacgaacggggatcttacaaaacattcacttatacattctacagagaaaccttttatc
tgcccagaatgtgggaaatgtttccgcataaaaagcaacctcaaatctcatgagaagact
cacactgggataatagattttgcctgtacagagtgtgggaaacggttcactgacaaacgc
agcctccaccatcacctgatgattcacaccggtgagagaccgtttgtctgcagtgagtgt
gggaaaagctacaggcagaagaagagcctaaatattcatctgcgagttcacacaggagag
aaaccctttgcctgcacagagtgcaataaaaccttccgattaaggagagggctagatatc
cacaaacagactcacactggcctgaagcgctttcagtgcaatgaatgtggtaaatccgtt
agtacaaagtcagaccttaacactcatcatcggacacatacaggagagaaaccctacccc
tgttccaaatgtgggaagagtttttccacaaagaaaagcttacaccaacacggtcacact
cacactgggataaagccatacgcctgtacagagtgtgggaaatgttttagaaataaggct
gatctgaaatgccaccaatctgcccatactggggagaaaccatttcagtgtacagagtgt
gggaaaagctttccatctcaaacagtgcttaatattcatcaaaagattcatacaggggga
aaaccatttcagtgtacggaatgtgacaagtgcttctgttatagacaggctcttacagct
catcagcggattcacactgggattaaagcttttggatgcaccgagtgtggaaaacagttc
ctggccaagtacagcctccagcggcacctgatgattcacaccggtgagaagccgtttgtc
tgtactgagtgtgggaaaagctacaggcacaagaggaacctaaatattcatatgaattct
cacacaggagataaaccttcagcctctagagactgtggcaaatga
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