Xenopus tropicalis (tropical clawed frog): 100489336
Help
Entry
100489336 CDS
T01011
Symbol
ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100489336 (ppfia2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100489336 (ppfia2)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100489336 (ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
100489336
NCBI-ProteinID:
XP_031754747
Xenbase:
XB-GENE-6041782
UniProt:
A0A6I8SQH0
LinkDB
All DBs
Position
3:complement(52673070..52882709)
Genome browser
AA seq
1241 aa
AA seq
DB search
MMCEVMPTINEDTPMSQRGSQSSGSDSDSHFEQLMVNMLDERDRLLDTLRETQESLGLAQ
QRLQDVIYDRDSLQRQLNSALPQEFAALTKELNACREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTAANQEIVALREQNAHIQRKMGTGEGPEQEALEGMEQGQKIHDKRLSNG
SIDSNDDASQMVELQELLEKQNYEMTQMKERLSSLSARVGEVEQEAESARKELVKTEEMN
TKYQRDIREAMAQKEDMEERITTLEKRYLSAQREATSIHDINDKLENELANKEAILRQME
EKNRQLQERLEMAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEA
QLEEKNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNILLQ
ESETFRKQLEECLHDKDRLQEEVEKLRSEVDQVKIRTGSLIEPTLTRPHLDSSAELRYSV
GSLVDSQSDYRSTKVIRRPRRGRMGVRREEQPVKSLGDHEWNRTQQIGVLSSHAFESDTE
MSDIDDDDRETIFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAE
EIENRVASVSLEGLNLARMHPGTSITASVTASSLASSSPPSGHSTPKLTPRSPAREMDRM
GVMTLPSDLRKHRRKIAVVEEDGREDKATIKCETSPPSTPRALRMTHTLPSSYHNDARGS
LTASLEPDVFGLGSTNSSQDSLHKAPKKKGIKSSIGRLFGKKEKARFGQLSKEFGLQGQG
AFMDADQAAQDSLGLGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWLELW
LGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAP
PTSRTPSGNVWVTHEEMENLTAPTKTKESEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQ
YRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKKLNYDRKELERRRE
TSQHEIKDVLVWSNDRVIRWIQAIGLRDYANNILESGIHGSLIALDENFDYTSLALLLQI
PTQNTQARQILEREYNNLLALGTERRLDESDDKNFRRGPSWRRQFPPREVHGISMMPGSS
ETLPAGFRLTTTSGHSRKMTTDVAPSGIQRLDSSTVRTYSC
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtaatgccgacgataaacgaggacacccctatgagccaaagggggtcc
caaagcagtggctcggactcggattctcattttgaacagctgatggtgaacatgctggat
gaaagggatcgcctcctggacacactgcgtgaaacacaggaaagccttggacttgctcag
caaagactacaggatgttatctatgacagagattcactccagcgacagctaaattctgca
ctgccacaggagtttgctgcattgaccaaggaactgaatgcatgcagggagcagctttta
gaaaaagaagaagagatttctgaactgaaagcagaaaggaataacaccaggcttttgttg
gaacatttggagtgccttgtttccagacacgaaaggtcactgagaatgacagtggtaaag
cggcaagcacagtccccctcaggagtgtctagtgaagttgaagttctaaaagcattaaaa
tcattgtttgaacatcataaagcacttgacgagaaggtaagggaacggctgagggtttct
ttggaaagagtctctgcactggaagaagagctaactgctgcaaaccaggagattgttgca
ttaagagaacaaaatgcccacatacaaagaaagatgggtactggagaagggcctgagcag
gaagctcttgaaggaatggagcaaggacaaaagattcatgataagagactgtccaatgga
tcgatagattcaaatgatgatgcaagtcagatggtggagctgcaggaactgcttgagaaa
caaaactatgaaatgacacaaatgaaagagcgattatcatcattgtcagcccgtgttggg
gaggtcgaacaagaagcagagtcagcaagaaaagaacttgtgaaaactgaagagatgaat
actaaataccaaagggatatcagggaggctatggcacaaaaggaggatatggaagaaaga
atcactactttagagaaacgctatctcagtgcacagagagaggcaacatccatacatgac
ataaatgacaagttggaaaatgaactggcaaataaggaagcaattttacgtcagatggaa
gagaaaaacaggcaattacaagagcggctggaaatggctgagcagaagttgcaacagact
atgagaaaagctgagaccttaccagaagtcgaagctgagttagcgcaaagaattgctgca
cttacaaaggcagaagaaaggcatgggaatattgaagaaaggatgaggcacctagaagca
cagcttgaagagaagaaccaagaacttcaaagagctcgacaacgggaaaaaatgaatgaa
gagcacaacaaaagattgtctgatacagtggaccggcttttaacagagtccaatgaacga
ctccagttacacttgaaagaacgaatggctgcactagaagacaagaatattttacttcag
gaatcagagaccttcagaaaacagctagaagaatgcttgcatgataaggatcggctacaa
gaagaagttgaaaaattaagatctgaggttgatcaagtgaagataagaacagggtccttg
atagaacctacattaacgaggcctcaccttgactcatctgcagagttaagatattcagta
gggtctcttgttgacagccagtctgactaccgctcaactaaagtcatacgaagaccaaga
agaggtagaatgggcgttaggagagaagagcaaccggtgaaatcacttggggaccatgaa
tggaaccgaacacagcagattggagtccttagcagccatgcatttgagagtgatactgaa
atgtccgacatagatgatgatgaccgtgaaacaatttttagttccatggacctcttatct
ccaggtggtcactctgatgctcaaactttagccatgatgcttcaagaacagctagatgcc
atcaataaagaaataagactcattcaggaagaaaaggaatctactgaacttcgtgcagaa
gaaattgaaaatagagtagccagtgttagcctagaggggctcaacctggccagaatgcac
ccaggtacatcgatcactgcttcagtcactgcttcatcattagcaagttcatcacctcca
agtggtcattctacacccaaactcacacctcgtagtccagcaagagaaatggatcgaatg
ggggtcatgacactaccaagtgatttgagaaagcatcgaagaaagattgcagttgtagaa
gaagatgggcgtgaagataaagccacaataaaatgcgaaacatcccctccttcaacacca
cgtgctctcaggatgacacataccttgccatcttcataccataatgatgccagaggaagt
ctgactgcttctcttgaacctgatgtgtttggtcttgggagcacaaacagtagccaagac
tctctgcacaaagctccaaagaagaaaggaatcaagtcatccattggccggttgtttggt
aaaaaagagaaggctcgattcggacagctcagtaaggaatttggtctacaaggtcaaggc
gcatttatggatgctgatcaagcggcacaagattccttgggcttaggaaaacttggaact
caagcagaaaaagacagaaggctcaaaaagaaacatgaacttctggaagaagcaagaaga
aagggacttccatttgcacagtgggatgggccaaccgtagttgcatggcttgaactttgg
ttgggaatgccagcttggtatgttgctgcatgtcgtgccaacgtaaagagtggtgccata
atgtctgccttgtctgatacggaaatacaaagggagattgggattagcaatcctctgcat
cgtttaaagctacggttagcaatccaagagatggtttcactcaccagcccatcagcgcct
ccaacatccagaacaccatcaggtaatgtctgggtaacccatgaggaaatggagaacctt
actgctcccaccaaaacgaaagagtcagaagaaggcagctgggcacaaacattggcatat
ggcgatatgaaccatgagtggattgggaatgaatggcttcctagtctgggcttaccgcag
tacagaagttacttcatggaatgccttgtagatgcccggatgctagaccatttaacaaaa
aaagatcttcgagtgcacttaaaaatggtggatagctttcatcgaacaagtttgcagtat
ggcataatgtgcttgaaaaaattaaactatgataggaaggagctggaaaggagaagagaa
acaagccagcatgaaattaaagatgtgttagtgtggagcaatgatcgtgtgattcgctgg
atccaagcaataggccttagagattatgcaaacaacatactggagagtggaatccacggg
tcacttattgccttggatgagaactttgactacacaagtttagctcttttgttacaaatc
ccaacacaaaatactcaggcacggcagatcctggaaagagaatacaataatttattggct
ttgggaactgaaaggcgccttgatgagagtgatgacaagaacttcagacgtgggccctcc
tggaggaggcagtttccaccacgtgaagtgcacggaatcagcatgatgccaggttcttcg
gaaacactgccagcaggattcagattaacaacaacatccgggcattcacggaaaatgaca
acagatgttgccccttcaggaatacagagattagacagctccacggtccgtacatactca
tgttga
DBGET
integrated database retrieval system
