Xenopus tropicalis (tropical clawed frog): 100489344
Help
Entry
100489344 CDS
T01011
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100489344 (gabrb1)
04082 Neuroactive ligand signaling
100489344 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100489344 (gabrb1)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
GABA-A
100489344 (gabrb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
100489344
NCBI-ProteinID:
XP_012811146
Xenbase:
XB-GENE-6049110
UniProt:
A0A803KBP9
LinkDB
All DBs
Position
1:38199499..38420725
Genome browser
AA seq
477 aa
AA seq
DB search
MWTLRGRGYFGMLSLPVMIAMVCCAQSVNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPS
VEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIKFYWNGGDKAITGVEKIELPQFSIIDYKMVSRNVIFSTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQLQKKAAEKAEKANNEKTKLEMNK
VQVDAHGNILLTTLELRNEVSGSEVLTSISDPRATMFSYDSASIQYRKPVANRDMYSRST
LDRHVVHKKGRLRRRASQIKIKIPDLTDVNGIDRWSRMIFPVAFAFFNVVYWLYYIH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggactctccggggcaggggatatttcgggatgctgtcgctgcccgtgatgattgcc
atggtgtgctgcgctcagagcgttaacgagcccagcaacatgtcatatgtgaaggaaaca
gtggatagattgctcaagggatatgacattcgcctcaggccagatttcggaggcccttcg
gtggaggttgggatgcgaattgacgttgctagtatagatatggtctctgaagtcaacatg
gattacacactaacaatgtacttccagcaatcatggagagacaaaagactatcatactct
gggattccattaaatctaacattggacaacagggtcgccgatcaactgtgggtgccagat
acatattttctaaacgataaaagatcttttgttcacggtgtcacagtgaaaaacagaatg
attcgacttcaccctgacggaacggttctttatggccttaggataacaaccacggctgct
tgtatgatggatctgcggcgatatccgttggatgaacaaaactgcacacttgaaattgaa
agttatggctacacgacagatgacatcaagttttactggaacggaggggacaaagccatc
acaggagttgaaaagattgagctgcctcagttttctattatcgactataaaatggtttca
aggaacgtcattttctccactggtgcctatcctcggctgtcgcttagttttcgcctgaaa
agaaatattggatacttcattttgcaaacctatatgccttctacattgattactatcctg
tcatgggtctccttctggatcaattacgatgcgtcggctgcaagagttgctttagggata
acaactgtactgaccatgacaacgatcagcactcatctcagagagactctgcccaaaatc
ccctatgtgaaagctatagatatctatctgatgggatgtttcgtatttgtgttcttagct
ttgctggaatatgcctttgtcaactatatattctttggtaaaggtcctcagcttcagaag
aaagcagcagaaaaggctgaaaaagcaaataatgaaaagacaaagctggaaatgaacaaa
gttcaggtcgacgctcacggaaacattctccttacaactctcgaactaagaaatgaagtc
agcggctcggaagtgctaacaagcatcagcgacccaagagccaccatgttctcatacgac
agcgcaagcatccagtaccgcaagccggtggccaacagagatatgtacagcagaagcact
ttagataggcacgtggttcacaaaaaggggcgcttaaggagaagggcatctcagattaaa
attaagattcctgatttgactgatgtgaatggcatagacagatggtcgaggatgatattc
cctgttgcttttgctttttttaatgttgtctattggctttactatatacactaa
DBGET
integrated database retrieval system
