Xenopus tropicalis (tropical clawed frog): 100489369
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Entry
100489369 CDS
T01011
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X2
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100489369 (fgd1)
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
FYVE_2
RHG20_PH
PH_alsin
PH_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100489369
NCBI-ProteinID:
XP_002939644
Xenbase:
XB-GENE-6453246
UniProt:
A0A8J0QW09
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Position
8:complement(25384444..25484267)
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AA seq
869 aa
AA seq
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MYMDKSNLRGPQHRPQPLVKSLSLEPAHVSAHPEKPQRQRSDSATSSDYNGVHPDPSTPK
PLAPRRSLTPKPEVPPKPAHLQSIRRPRPPGHIPPPPSRPLPADPRLARICLSRPDNKDG
TPSAVTSLIEKFEREPIILPIERTTLGHGTDINPDMDSSPSPSLQHSGYSMGELGHKLLD
LLEPEVSQGSLERRRRLGVEGGDAGEMGEQDSGGKLANRDSGIDSISSPSTSEEMCFLGE
VDEGGREESETCYSVAQRCSARDSEGDSDMEDGSGDEGELPPERLDPCEFTARQKVYKIA
NELLQTEKAYVSRLHLLDQVFCARLMDEARTRASFPVEVVMGIFSNICSIYCFHQQFLLP
ELEKRMQEWDSNPRIGDILQKLAPFLKMYGEYVKNFDRAMELLNVWTERSSQFKSVIQEV
QREEACGNLTLQHHMLEPVQRIPRYELLLKDYLLKLPEDSKDRCDAEKSLELIATAAEHS
NAAIRKMERMHKLLKVYELLGGEEDIVSPTNELIKEGHILKLSAKNGTTQDRYLILFNDR
LLYCVPKLRLIGQKYSVRARIDVEGMELKHSSSPNLTRTFRVSGKQRSLELQARTEEEKK
DWIQAIEATINRHEQAMESCKLLCTSIREDEETPPNSPNTDLGKRAPTPIREKEVTMCMK
CQEPFNSITKRRHHCKACGHVVCGKCSEFRARLVYDNNRTNRVCVDCYGALRGSLASPVY
NAHTPQRRKSILEKQASVVAEHSVMCSYMHYMEKGAKSWHKAWFVIPQNEPLVLYIYGAP
QDVKAQRSIPLIGFEVSPTEPGERSDRRHVFKISQSQLSFYFSPETEELQSRWVSALSRA
GRGEDCHPKILLLETEEESEVFESPLGNT
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggataagagcaacctgcgaggtccccagcacaggcctcagccgcttgttaaa
agcctttccttggagccagctcacgtttctgcgcacccggaaaagccccagcggcagcgc
tcggattctgcaacctcttctgactacaacggggtacacccagacccctctacacctaaa
ccactggctccaaggcgctctctgactcctaaacctgaagtccctcccaagcctgcgcac
ttacaaagcataagaaggccacgacctcctgggcatatcccaccacctccctcccggcca
ttgccagcggacccccggctcgcaaggatttgtttgtcacgtcctgacaacaaagatgga
accccttcagcagtcacatctctgattgagaaatttgagagggagccaatcatcctcccc
atagaaagaacaactctgggtcatggcaccgacataaaccctgacatggacagttctccc
tctccctccctccagcattcagggtacagcatgggggaactggggcacaagctccttgac
ttgttggaacctgaggtatcccaaggcagcctggaaaggagacggcggcttggtgtggag
ggaggagatgctggtgaaatgggtgaacaggactctggggggaaactggcaaacagagac
agtggcattgacagcattagctctccctccaccagcgaggagatgtgcttccttggtgag
gtggatgagggtggccgggaggagagcgaaacctgttatagtgtggcccaacgctgctca
gcgcgtgactccgaaggcgacagtgacatggaggacggaagtggtgacgagggtgaattg
ccacctgaaagactggatccatgtgagttcacagctcggcagaaggtgtacaaaatcgct
aatgagctgctgcagacagagaaagcctacgtgtcacgcttacatctgctggaccaggtg
ttctgcgctcggctcatggatgaagcacgcacaagggcctcattccctgtggaggtggtg
atgggaatcttttccaacatatgctccatttactgttttcatcagcaatttttgctgccc
gagcttgaaaaacgcatgcaagagtgggacagcaacccccgcatcggtgatatcctgcag
aaattagcgccctttcttaaaatgtacggagaatatgtcaaaaactttgaccgggctatg
gaactgctaaatgtctggactgagagatcatcccagtttaagagtgtaatccaggaggtg
cagagggaagaggcatgtgggaacctgacgttacagcaccacatgttagagcctgtgcag
aggatcccacgttacgagcttctgcttaaggactatctcctgaagttgcccgaggattcc
aaagaccgatgtgatgcagaaaagtccctggagttaatagccacagcagctgagcattcc
aatgcagccatcaggaaaatggagcggatgcacaaactccttaaagtgtatgaacttctg
ggtggagaggaggacattgtcagtcccaccaatgagctgatcaaagaagggcatatatta
aagctttcagccaagaatggcaccacccaggacagatacctcatactgtttaatgaccgg
ttgctgtactgtgttcccaaactgcgcctcattggccagaaatacagcgtacgggctaga
attgatgtggaagggatggagctgaagcacagcagcagccctaacctgacacggacattc
cgggtgtctggaaaacagaggtcactggagctacaggccagaacagaagaagagaagaaa
gactggatccaggctattgaggctacaataaatcggcatgaacaggcaatggagtcatgc
aaactgctctgcacgtccattcgtgaggatgaggagacgccaccaaactctccgaacaca
gacctgggaaaacgagcaccaacccccatccgagaaaaggaagtgaccatgtgcatgaaa
tgccaggaaccatttaactccattaccaaaaggagacaccactgcaaggcttgcggccat
gtggtatgcggaaagtgctctgagtttcgtgccaggcttgtttacgataataaccgcaca
aatcgagtctgtgtggactgttatggtgctctacgtgggtctttggccagcccagtatac
aacgctcacacgccacagcgcaggaaatccatactagagaaacaggcctcggtggtggca
gaacacagtgttatgtgtagttacatgcattacatggagaaaggtgccaagagctggcac
aaagcttggtttgtcatccctcagaacgagcctttggtgctatacatctatggcgctcct
caggatgtaaaggctcagcgcagtattcccctcattggatttgaggtgagtcctacagaa
ccaggtgagcgctctgaccgcagacacgtcttcaaaatcagccagagtcagctcagtttt
tacttcagccctgagacagaggagctgcaaagtcgctgggtgagcgctttgtcccgggca
ggacggggggaagactgccaccccaaaatacttttgttggaaactgaggaggagtccgag
gtatttgaaagccctttaggaaacacttga
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