KEGG   Xenopus tropicalis (tropical clawed frog): 100489391
Entry
100489391         CDS       T01011                                 
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-gamma
  KO
K08534  RAR-related orphan receptor gamma
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xtr03000]
    100489391 (rorc)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:xtr03310]
    100489391 (rorc)
Transcription factors [BR:xtr03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    100489391 (rorc)
Nuclear receptors [BR:xtr03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   100489391 (rorc)
SSDB
Motif
Pfam: Hormone_recep DUF4871
Other DBs
NCBI-GeneID: 100489391
NCBI-ProteinID: XP_031747715
Xenbase: XB-GENE-481075
UniProt: A0A8J1ISI6
LinkDB
Position
8:complement(143637646..143644563)
AA seq 422 aa
MRSHPNNGPELRWGYVESRLITVQLSILAVKFGRMSKKQRDLLQQEVRRMEEQRMLPTSI
ACSAGSHGDKTALPSSSELPSPFVSASWTGHGKWDTSCSVRPCPVPRTHPPIQSHHPEKI
QTEAVSRKSCFRDHQPYLEHSRLNIFQRLPPTLQSPECYGSPNFSSCLLSERLISAVELD
LLMQNVVGAYRETCKLHQESLQAMRWETFTPAEIQSFQQKTMDQMWERCVCHITDAIQYI
VEFAKRLSGFMELNPNDQIVLLKAGAMELLLIRMSRAFNCYNSTIYFEGKYAPLDLFQSL
GCNDLISAMFDLCHSLCALNLSEHEMAFFSSMVLLDPSQPWLQEKEKVESLHMKLDLSFR
QLLRRTRRESIICKLPQRGRLLGICQLHMEKLNIFRQMYPGIAWERFPPLYKELFVSDTE
SS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcgaagtcatccgaataatggtccagagttgagatggggctatgtcgagtctagatta
atcactgtacaactttctattttagcggtaaagtttgggcgcatgtctaagaagcagagg
gaccttttgcaacaagaggtgagacgcatggaagaacaaagaatgctacctacctctatt
gcctgcagtgctggttcccacggagacaagactgctcttccttcatcttccgagctccca
tcgccctttgtatctgcctcatggaccggacatggcaaatgggacacttcttgctcggtt
cggccatgcccggtgcctagaactcatcctccaatccagagtcaccacccggagaagata
cagacagaggctgtgagccggaagtcctgtttcagagaccaccagccttacctagaacat
tcgaggctgaacatctttcagagactccctcccactctccagagtccggaatgttatggg
agcccaaacttttccagttgtctactctcagaacgcctgatttctgctgtagagctagac
ctcctcatgcagaatgtcgtaggtgcctatcgggaaacgtgtaagcttcaccaggagagt
ctacaagcgatgaggtgggaaacatttaccccggccgagatacaaagtttccagcagaag
accatggaccagatgtgggaacgctgtgtgtgccatatcaccgatgccatccagtatatc
gtagagtttgccaaacgtcttagtggcttcatggaactcaatcccaatgaccagatcgtc
cttctaaaagctggggctatggagctgctccttattagaatgagccgggccttcaactgc
tacaacagcaccatctactttgaaggcaaatatgctcctctggatcttttccaatcacta
ggctgcaatgacctcattagtgccatgtttgacctgtgtcattctctgtgcgccctgaat
ctatctgaacatgaaatggccttcttcagctccatggttctcctggatccaagccagccc
tggctacaagagaaagagaaggtagagagcctccacatgaaactagatttgtccttcaga
caattgctgagaagaactcggcgagaatctattatctgcaagctgccacagagagggagg
ctgctcggtatctgccagctgcatatggagaagctgaatattttccggcagatgtatccc
ggcatcgcgtgggagagattcccccctctctacaaagagttgtttgtctccgacacagag
agctcctga

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