Xenopus tropicalis (tropical clawed frog): 100489423
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Entry
100489423 CDS
T01011
Name
(RefSeq) toll-like receptor 5
KO
K10168
toll-like receptor 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04620
Toll-like receptor signaling pathway
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100489423
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100489423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100489423
Pattern recognition receptors [BR:
xtr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100489423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_9
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
100489423
NCBI-ProteinID:
XP_002937550
UniProt:
A0A6I8PTE7
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All DBs
Position
4:complement(31584390..31588805)
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AA seq
653 aa
AA seq
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MMLLPFIILLFPVSLLSGFQPLSNNSNCKAFQDKSHFVFNCLANGLYSIPSHIPPQTQSL
LFSFNRIPSISQDSFPDLLHLQTLLLGSQVTPGTFSVGKSAFRGFPNLITLDLGGNRIIN
LHPEAFEGLSWLEVLLLDHNGLDESVLESGMFKDLTSLKKLDLSFNNIRRVRPDPTFLKL
SSISFLLLKFNKVSMLCGEDLQNLQGRRLQLLDMSSNPLQLSSTPHCTNPFNNITLGTLD
VSSMGWNAEMVENFVRTISGTQVDYIKMRHTAGLGSGFGFHNLKDPNKDTFSGLNSSNVQ
ILDLSNGFISHLVPQLFSAFPKLLSLDLSSNQINRMSSGAFSGLGELVSLNLSGNLLGEL
MGSSFQGLGATSLKTLDLSSNHIGAVQYGALDSFTALTSLNLRDNALNKIPPTKLQGVTF
VLLKQNRISDIYNIISFCPHATILDLSSNRLTDFRSLWQILELQSLKYLSLASNSLYRCS
LPHTSNITRTSGLVYLDLSDNALGPVLKSGECGDIFMHLGSLKSLNLARNQLSNIPDTMF
RSLSSLQTLDLSGNGFKEIQSNLFTGLTALKTLNLGKSNLVTLSSSVLDPLGSLESIDLS
EVTLVCDCSLWDFWKWLEDTNVTVNVGKQEVLCIQPTPRIPEIPLATFLKSSC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgatgttacttccattcattatcctcctcttcccagtctcattactcagcggatttcag
ccactttctaataattccaactgcaaagcattccaggacaaatcacactttgtatttaat
tgtctggccaatggcctatattccatcccatcacatatacctcctcaaacccaatcactc
ctcttctccttcaaccgtattccatctatctctcaggactccttcccagaccttctccat
ctccagactctattactaggtagtcaagttacacctggcaccttttctgttgggaaatct
gccttccgtgggtttcccaatttgattacccttgacttgggaggcaaccgcatcatcaat
ctgcaccctgaagcatttgagggattgtcttggttagaagtccttctcctggatcataat
ggtcttgatgaatctgtacttgaatccggcatgttcaaggatcttacctcccttaagaag
cttgacctttcttttaacaatatccgcagagtacggcctgatccgacttttctgaagtta
agttccatttcattcttgcttctgaagttcaacaaagtcagtatgttgtgtggtgaagat
ctgcagaacctgcaaggaaggagactgcagttacttgacatgtcctccaaccctctacaa
ctttccagtacccctcactgtacaaatccattcaacaacattacccttgggaccttggat
gtctcgtctatgggttggaatgctgagatggtagaaaattttgttaggacaatttcaggt
actcaagtggactatatcaagatgaggcacactgctggcctgggaagtggatttgggttc
cataatctgaaagacccaaacaaagacactttctctgggctaaattccagcaatgtgcag
atccttgacttgtccaatggtttcatctcccatttggtccctcagcttttttctgctttt
ccaaaactcttgtccctagatctctcctccaatcaaattaaccgaatgagctctggggca
ttttctggtttaggtgaactggtgagccttaatctgtctggaaacctcctgggagaactt
atgggcagcagtttccaaggtctgggagccacttcattgaaaacgttagatctaagttct
aatcatattggtgctgtacaatatggagcattagatagttttactgctttgacatcacta
aatctaagggacaatgcccttaataaaatcccaccaaccaagcttcaaggtgttactttt
gttttgttaaagcagaacagaatttcggacatttacaacattatatccttctgtccacac
gccacaatcctagacctttccagcaatcgcttaactgactttaggtccttgtggcagatc
ctggaactacaatccctaaaatatctatccttagctagcaactccctctacagatgctcc
ctaccacatacgagtaacataacaaggacaagtggccttgtatatttggatctttctgat
aacgcattgggaccggtgcttaagtctggggagtgtggagacatttttatgcacttggga
agcctcaaatccctaaacttagccaggaaccaactgtctaacattcctgacaccatgttc
aggagcttgtccagtttacagacattggacttatctgggaatggatttaaagaaatccaa
agcaacttatttactggccttactgccctgaagaccttgaatctggggaaaagcaacctt
gtgactctttcatcatctgtcctggaccctctgggttccctcgagagcattgacttgtca
gaggtgacactggtgtgcgactgcagtctttgggatttctggaaatggctggaggatacc
aatgtcacagtaaacgtaggaaaacaagaggttttgtgcatacagccaactccaagaatc
ccagagataccattagctacttttttaaagagcagctgttag
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