Xenopus tropicalis (tropical clawed frog): 100489424
Help
Entry
100489424 CDS
T01011
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100489424 (sorcs2)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Others
Others
100489424 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
100489424
NCBI-ProteinID:
XP_002938309
Xenbase:
XB-GENE-956152
UniProt:
A0A8J0QPJ7
LinkDB
All DBs
Position
1:24563406..25065046
Genome browser
AA seq
1124 aa
AA seq
DB search
MALRGPLLPPPVGILCLSLLVLLAQGTGHRVSRSALDLAEPGSSAAGDDGSTGEAYPSSG
RPRRAASRGRISLLSTSFVLKGDASHNQAMVHWTGENSSVILILTKYYHADMGKVLESSL
WRSSDYGTTYTKLNLQPGVTTVIDNFYICPTNKKKIILVSSSVSEQCLFTSSDEGATFQK
HQIAFFIETLIFHPKEEDKLLAYSKDAKLYVSINLGKNWDLLKERASKDKIFWSVAGVDT
DPDVVHMEVQDLDGGYRYVTCQIHNCSDNTFAFQFTGNIDRDSLTVQDDYIFLKTTAGNR
SKYYVSYRRNEFVQMRLPKYALPKDLQIISTDENQVFIAVQEWYQTDTYNLYQSDPQGVY
YSLVLENVRSTKQPEENVVIDILEVRGIKGVFLANQKIDGKVTTLITYNKGRDWNYLNPP
STDMNGKPTNCKPPECHLHLHLRWADNPYVSGTVHTKDTAPGLIMGAGNLGSQLVEYKEE
MYITSDCGNTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILRFSIDEGHTWSVHNFTS
TSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRPSFATECTEEDYDPWNLATPQ
GDQCIMGQQRSFRRRKISSWCIKGRSFTSALTSKICQCGNSDFVCDYGYEQETLQRSQAS
KCFADFWFNPESPPEDCVIGQTYTSTTGYRKLVSNVCEGGIDLQENLVRYPCPLLAPRGL
RIAIKGDSIAVKPGEEITFIIHQDQGDVLNTKYQVDLGGGVKVNLSMASEPIQHRYESPG
IYRVSVKAENMAGQDEAVIYVQVNPPLQALHLEMVPVVGKNKEVNLTAVIQPRNANLTVF
YWWIGNNLQPILTLDNYLVTRFAEAGEFRVTVQVSCWNSMLQDSKTVKVFDEYQVLSLMF
SKNLDMYNPNIPEWRDDIGQIVTRLIVKETNVPEQTIVTVVKPGLPTTAELYLLPPTDVQ
KRKRSAPNDKRIAVIKQVLNAHNISFFLRGGFWVLVTLSDSESDSQRIGGAGGYWAILII
FAICLVPVGAFILYKFKRKMPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDD
MDTQTLGHGRVRLSGRAGHLSSYTIPLLSVPTSAQTQVITQAWF
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagggggccacttcttcctcctcctgtgggcatcctctgcctgtccctgctg
gtgctgcttgcccagggcacagggcacagggtgagcaggagtgcattggatctagcggag
ccggggagcagcgctgctggggatgatggatctacaggggaggcttatccttcctcagga
cgccccaggcgggcagcctccagggggcgcatttcgctgctcagcacctcctttgtgctc
aagggggacgcgtctcataaccaggcgatggtgcattggaccggggagaacagcagtgtg
atactgatattgaccaaatattaccatgcggatatggggaaggttctggagagttcttta
tggagatcgtctgattatggaacgacatacacaaaattaaacctacagcccggggtcact
acagtgatagacaacttctatatctgtcccacgaacaagaagaagattattcttgtcagc
tcctcagtctcagaacaatgcctcttcactagcagcgatgaaggagcgacctttcaaaag
caccaaattgctttctttatagagaccctgatatttcatcccaaagaagaggacaagtta
cttgcctatagcaaagatgccaagctctacgtatccataaacctcggaaagaattgggac
ctcctgaaagaacgtgccagtaaagacaaaatattttggtctgttgcaggagttgatacg
gatcctgatgtggttcatatggaggttcaagaccttgatggaggttatcggtacgtgaca
tgccagattcacaattgttctgacaatacatttgcatttcaattcactggaaacattgat
cgggattctctgactgtacaggacgactacatcttcctcaagacaacagcaggaaaccgg
agtaaatattacgtatcctatcgacggaatgaatttgtacagatgagactaccaaaatat
gccttgccaaaggacctacagataatcagcacagatgaaaaccaagtgtttattgctgtc
caagaatggtatcagacagacacctacaacctgtaccagtcggatccccaaggagtttat
tattcccttgttctggaaaatgtgaggagcaccaagcagccagaggagaatgttgttatc
gatatcctcgaggtgcgaggcattaagggagtctttctggccaatcaaaaaatcgatggg
aaggtgacaacacttattacctacaataaaggccgagactggaactacctcaatccccca
agcacagacatgaacggcaaaccaaccaactgcaaacccccggagtgtcaccttcacctg
catctccgctgggcagacaatccgtacgtatctggaacagtccataccaaggacacggcg
ccaggcctcattatgggagcaggcaatctgggctcgcagctggtggagtataaggaagaa
atgtatattacgtcagactgtggaaatacatggagacaagtctttgaagaggaacatcac
atcttgtatttagaccatggcggtgttattgtggccatcaaggacacttcaattcctcta
aagatactcaggttcagcattgatgaaggccacacgtggagcgtacacaacttcaccagc
acttcagtgttcgtagatgggttgctcagtgaaccaggagatgagacgttggtcatgacg
gtatttgggcacataagttaccgctcagactgggaactggtgaaagtcgatttcagacca
tcattcgctacggaatgtacagaagaagactacgatccatggaaccttgccaccccacag
ggggaccaatgcattatgggccagcagcgaagttttcggaggagaaaaatatcctcatgg
tgcatcaaagggagaagcttcacgtctgcgctaacatctaaaatctgccagtgtgggaac
tcagactttgtctgcgattatggatacgaacaggagacacttcagagatcccaagccagc
aagtgtttcgctgatttctggtttaaccccgagtctccgcctgaagattgcgttattggt
caaacctacacaagtaccacagggtacagaaagcttgtctccaatgtatgtgaaggcggc
attgaccttcaggagaatttagtccgatatccctgtcctctgctcgccccgaggggtctg
cgcatcgccattaagggagattccatagcggtgaagcctggagaggagattacatttatt
attcatcaggatcagggtgatgtgctgaataccaagtaccaagtggacctcgggggtgga
gtcaaagtgaatctctcaatggcaagtgagcccatacagcatcgctatgaaagccccggg
atctacagggtgtctgtaaaggcagagaatatggccgggcaggacgaggccgtgatctac
gtgcaggttaaccctcctcttcaggctctgcatcttgaaatggtgccagtggttggaaag
aacaaagaagtgaatctgacggctgtgatccagccaaggaacgcaaacctgactgtgttt
tactggtggattggaaacaacttgcagccaatccttacactggacaattacctggtgacc
aggtttgctgaggctggggagttccgagtcacagtgcaagtctcctgttggaactctatg
ctgcaggactccaaaacagtcaaagtctttgatgaataccaagttctatcactgatgttc
agcaagaacctggatatgtacaatcccaacatcccagagtggagagacgacataggacaa
attgtaacaagactaatagtgaaggaaaccaatgtccctgagcaaacaatagtgacggtg
gtaaaaccaggacttccgaccactgcggagctgtacctgctcccacctaccgacgtacag
aaaagaaagagaagtgctccaaatgataagagaatagccgtgataaagcaagtcctcaat
gcgcacaacattagtttcttcctgaggggtggattttgggtcttggtgacactaagcgat
tcggaatcagactcccagaggattgggggagccggaggatactgggccatactcattatc
tttgccatctgccttgtaccggttggagcttttatcctttataaattcaaaaggaaaatg
ccggggaggaatgtttacgctcagatgcacaatgaaaaggagcaggaaatgacaagtcca
gtcaatcacagcgaggacacccagaacattatccagggagaggagtttattgatgatgac
atggacacgcaaactctaggacatgggagagtgaggctctctgggagagctggacatttg
agcagctacacgatccccttattgtcggtgcctaccagtgcccaaacgcaggtaatcact
caggcgtggttttaa
DBGET
integrated database retrieval system
