Xenopus tropicalis (tropical clawed frog): 100489477
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Entry
100489477 CDS
T01011
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100489477 (exd1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100489477 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF2642
His_Phos_1
Motif
Other DBs
NCBI-GeneID:
100489477
NCBI-ProteinID:
XP_002939597
Xenbase:
XB-GENE-993341
UniProt:
A0A6I8PSH2
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Position
8:complement(115668268..115688045)
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AA seq
493 aa
AA seq
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MDSIIDPGFLSRVIGKTIKITLTTGSIQGVLINVHPGRTILINKVKDLATGKMIPGAQLL
FGYTILNVELQKDLEEVPVKQSEEQTTEEREQAPTEQDHIDDGSQDAERTQSDTGKPQDL
RTRTLQVIKLSVDEEEVEYTIIDQFQPIFGPAIHHLQNQKVISIGAVGQNICRHGKLSWL
QFATKSRVYLFDVLVLGSKVFKNGLQMVLEDTGILKVIHDCRWLGDILSYQYGIILNNVF
DTQVGDVYLFSMETGGFLPHRIRTLEECLIHHLSMLPSRVSFLAHKLPLTEEYDDIWFDR
PMDPTLLKLLSLEVIHLLPLRSAMLDAMLADFTLLVEGYLNAFRRGTANILESSEVSGSG
LPKELQQLRVLQQMRREKALKEYDVNNKGLLTRGKAEKAPQSKPSITKHDTEPENAVKLT
MKSEESLYQTMATSATHLENQEKNHGALCQNFPVRSNFCPRGPCDSLKPQPLRPPLPSLV
ANLRMPSLLAMGK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggacagcattattgatcctggtttcttgagtcgggtcattggaaaaaccatcaaaatt
acactgaccactggttctatccagggtgtgttaattaatgttcaccctggccggaccatc
cttataaacaaagttaaagatttggcaacaggcaagatgatacctggagcacaactgcta
tttggatatactattttaaatgtggaattacagaaagatctggaagaggttcctgtgaag
cagtctgaagaacagaccactgaggagcgggaacaagctcccacagagcaagaccatata
gatgatggcagtcaagacgcagagagaacacaatctgacactggcaaaccccaagacctt
cgcactcgaacgctgcaagtcataaagctttcagtggatgaggaggaggtggaatacact
attattgatcagttccagccaatatttggcccagctatccatcacctccaaaaccagaaa
gttatcagcataggcgctgttggacagaatatctgtcgacatggaaagctctcatggttg
cagtttgcaaccaaaagtcgggtatatctctttgatgttcttgtccttggatcaaaagtc
tttaaaaatggattacagatggtgcttgaagatacaggtatacttaaggtgattcatgat
tgtcgctggcttggagatattttgtcctaccagtatgggattatccttaacaatgtgttt
gacacacaggttggggatgtctatctgttttccatggaaacaggaggcttcctaccacac
cgcattagaacactggaagagtgtctgatacaccacctcagcatgctgccctcgagggtt
tcctttctggctcataaactgcctttaactgaggaatacgatgatatctggtttgatcgc
ccaatggaccctactctcctaaaattattgtcactggaagttatccaccttctgccacta
cgctctgctatgctagatgctatgttagctgactttactttattggttgaggggtacctc
aatgccttccgacggggaacagcaaacatacttgaaagttcagaggtttctggttctggg
cttcccaaagaacttcaacagctccgtgtccttcagcagatgagaagagaaaaagcttta
aaagagtatgatgtgaacaataaagggcttttaacaaggggaaaggctgagaaagcacca
caaagtaaaccctccataacaaaacatgacactgagccagagaatgcagtgaagttaacc
atgaagtcagaagaatcactctatcaaacgatggcaaccagtgcaacgcacttggagaac
caagaaaaaaatcatggtgcattgtgtcagaatttccctgtcaggtctaatttttgtccc
agagggccctgtgatagtttaaagcctcaacctctgcgccctcctttgccttccttggtt
gcaaatctcagaatgccatctctactagcaatgggcaaataa
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