Xenopus tropicalis (tropical clawed frog): 100489572
Help
Entry
100489572 CDS
T01011
Symbol
nlrx1
Name
(RefSeq) NLR family member X1
KO
K12653
NLR family member X1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
xtr04621
NOD-like receptor signaling pathway
xtr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100489572 (nlrx1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100489572 (nlrx1)
04622 RIG-I-like receptor signaling pathway
100489572 (nlrx1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100489572 (nlrx1)
Pattern recognition receptors [BR:
xtr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100489572 (nlrx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRX1_C
LRR_6
NLRC4_HD2
AAA_16
DUF815
NOD2_WH
LRR_4
AAA_22
nSTAND3
TsaE
VapE-like_dom
AAA
Motif
Other DBs
NCBI-GeneID:
100489572
NCBI-ProteinID:
XP_004916107
Xenbase:
XB-GENE-6039800
UniProt:
F6YYZ9
LinkDB
All DBs
Position
7:complement(80381153..80407310)
Genome browser
AA seq
953 aa
AA seq
DB search
MQCCCSETLFGALGRWKIRLSIKEVSRLYQKRVYHSLISRNGSHLTLLSQGQQFCCLQGW
RASSSVAVDPIQQHRLRLSDWFSRLPSEEQHFGPSFSLDSIHVDPVIRESCLEETLRPLT
EFTLQSQFQSPPCSQNVSVTQLFQPISSGQRVRNVVLYGTVGTGKSTFIRKLVLDWCHGR
RKEFQLIIPLSCEDLSEIKAPVSFSRLISKKYVHLRDLLPTLSQQPGVLFILNSLEWMDL
DFRMASTELCSDPNEPLSPSAILVNLLRGYLLPEASVLVTTRPSALRRIPGKYVGRYAEI
CGFSDMELQKMYFHLRLGHKDADVRETENLLEMLNRNLEHHSQLSAACFLPSYCWLTCAT
LHLLYYTKPGNPTRTLTGIYTSFLRLNFAGEVLDITHPSKISLMLYVARFVGKLAYEGCR
SRQTRFSEADLNRCFNVALNSEEDINLLSVFRTDAFHFFLTPCIKPGHETTFVFTIPAMQ
EYLAALYVVLGENKTTLQRVGREVSDIINKAGEDVVAVVNVLSKFLPLRIFALFNLLRVV
PKLYGKVSGQSRENIAQTMTSEMFREEDAFNDDVLDQINSSILGVEGPSQNTDEDVFGKQ
EAFELFPIFMAGLLSRQNRAMLDQLGCSIMNTSALEITRGLKKHLLRCSLRRLPPTELMD
FLFFLYEFQNEAFTAGLVSSLQDLDLSAVRMTPLKCTVVSSVMGGSGKPMTEANFKSCDL
DPDAIRALSPVLRRCQSLNLQMNSLGPDSCKEIKDVLLHPDCAVTSLRLCNNPLTSEGGR
LIAEALAGNNSLRHLSLLHTNLGDEGAEILASQLGKNTHLQELNLAYNGIHDQAALRLGE
EAARNPTLDRVHLYFNELSDSGLRSLQSFGGVRILVSLTEGADASRHWSLILRELRANAG
GWDQQRISSHLTLLLRDLQSSRALTGNLLRKARLLRVETEVKRMLSRIQQGQL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgttgctgctctgagaccctttttggggcactgggaaggtggaagattagactt
tctattaaagaagtatctcgattataccagaaacgtgtctatcactccctgattagtagg
aatgggtcccatttgaccctgctttcccagggccagcaattctgctgtcttcaaggctgg
agggcttcaagcagtgttgctgtagatccaattcagcagcaccgactgcgcctgtctgac
tggtttagccgcttgcccagtgaggagcaacactttggtccatctttctcccttgattcc
atccacgtggaccctgttattagggaaagttgcttggaagaaactctgcgtcctctcact
gagtttaccttgcagagccagtttcagagcccaccatgttcacaaaacgtgtcagtgact
caactgtttcagcccatatcttctggacaacgagttcgcaatgtggtattgtatggtact
gtgggcactggaaagagcacattcatacgaaagctggtgttagattggtgccatgggcgc
aggaaggaatttcagctcattattcctttatcctgcgaagatctttctgagatcaaggca
cctgtgtccttttcacggcttatctctaaaaagtatgtccacctacgtgatctgttgcca
acactatcccaacagcctggggttctgtttattttaaacagcctggagtggatggatttg
gacttcagaatggcttctacagagctttgcagtgatcccaatgaacccttatcaccctca
gccatactggtgaatttgttgagggggtacctccttccagaggccagtgtattggttacc
actcgtccatctgctctaaggcggatccctgggaaatatgtgggccgttatgcagagatc
tgtggcttttcggatatggagcttcagaagatgtatttccatttgcgcttgggccacaaa
gatgctgatgtacgggagactgagaacttgttagagatgttgaatcggaacctagaacat
cacagtcagctatctgctgcctgcttcttgccatcgtattgctggttaacctgtgccact
ttacaccttctctattacactaaacctggtaaccctactaggactctgactggcatttac
actagttttttgcgtctcaactttgccggagaggttctggatataactcacccatccaaa
atttctctcatgctttatgtggcacgttttgtaggcaaattagcatacgagggctgccgt
tctcgacagactcgcttttctgaggctgacctcaaccgctgttttaatgttgcattaaat
tctgaagaggatatcaacctccttagtgttttccgtacagatgcattccatttcttcctt
acaccatgtatcaagccaggtcatgagacgacttttgtgttcaccatccctgccatgcag
gagtatcttgctgcactttatgtcgtgcttggagagaataagacgacccttcagcgtgta
ggaagggaagtctctgatatcattaacaaagctggagaagatgtggttgcagtggtcaat
gtgttgtcaaaattccttcccctacgtatatttgcgctttttaatctgttgcgtgtagtt
cctaagctgtatggcaaggtgagtggacagagccgtgaaaacattgcccaaacaatgact
agtgaaatgtttcgggaagaagatgcttttaatgatgatgttttagaccaaatcaactct
agcatattaggtgtagagggaccctctcaaaatacagatgaagatgtgtttgggaagcag
gaagcatttgaattgtttcccatatttatggctggacttctgtctcgtcagaatcgagct
atgttggaccagctaggctgctcaatcatgaatacatcagcacttgagattacacgggga
ctgaagaaacacttgctgaggtgtagtcttcgccgattaccacctactgagctgatggac
tttctgttcttcttgtatgagttccagaatgaagcatttacagcaggacttgtttcctcg
ctgcaggatttagacctttctgctgtgagaatgacacctcttaagtgcacagtggtgtcg
tccgtaatgggaggctcagggaaacccatgacagaggccaacttcaaatcctgtgatctg
gatcctgatgcaatacgtgctctgtctccagtactacgaagatgtcaaagcttaaattta
cagatgaactcacttggtcctgactcttgcaaagagataaaagatgttctcttacatcct
gactgtgcagtcactagtctaagactctgcaataatccattaacatcagaaggaggccgc
ttgattgctgaagctctggctggcaataattctctgagacatctctcgcttttgcacact
aatttgggggatgaaggggcagagatactggcctcccagttggggaaaaacacacacctg
caagagctgaacctggcatataatggcatccatgaccaagcagcactgagactaggagag
gaggcagctcgtaacccaacgctggacagagtacatctgtactttaatgaactgtccgat
agcggtcttcgttctcttcagtcattcggtggtgttcgaattcttgtgtctctgactgag
ggagcagatgcttcccgccactggtctctaatcttacgggagctccgggctaatgccggt
ggctgggaccagcaacggatcagtagccacctcacgctgcttctcagggatctacaaagt
agtcgtgcactcactgggaacctgttgcgcaaggcacgccttctacgtgtggagacagag
gtcaaacgcatgctaagccgtatccagcaagggcagctctga
DBGET
integrated database retrieval system
