Xenopus tropicalis (tropical clawed frog): 100489783
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Entry
100489783 CDS
T01011
Symbol
cdh12
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100489783 (cdh12)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Major cadherins
100489783 (cdh12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
ASFV_J13L
DUF443
DUF6232
Motif
Other DBs
NCBI-GeneID:
100489783
NCBI-ProteinID:
XP_017950450
Xenbase:
XB-GENE-982876
UniProt:
F7CIG1
LinkDB
All DBs
Position
6:complement(81202070..81612715)
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AA seq
826 aa
AA seq
DB search
MVKLKKVQSWILQFCCPYWNFNYPAVGKSFPMLTRNSLSLLLWFLFDGGLLTPLQSQQPP
QISSPKQRENAIITMPGRRSAAQRVKRGWVWNQFFVLEEYMGSEPQYVGKLHSDLDKGIG
SVKYTLLGDGAGTIFTIDDTTGDIHAIKSLDREEKPFYTLRAQAVDIVTGKPVEPESEFI
IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGSSARVVYSILQGQP
YFSIDPKTGVIRTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPP
RFPKSIFHLKVPEASPVGSPIGKIRAVDPDFGRNAEIEYSIVPGDGGNLFDIKTDDDTQE
GIIFLIKPLDFETKKAYTFKVEATNVHLDHRFNSVGPFKDIATVKINVLDVDEPPVFSKP
FYTMEVYEDTPTGTIIGAVTAQDLDIGTSPIQYSIDAQTDADNNFVVDANEGTVATNALL
DRESTAQFNISIIASKVNNPQLASLVKIIINVLDINEFPPEVYLPYETSVCENAKPGQII
QIIGAVDRDMSPAGQIFSFRQPPDSSANPNFTIHDYKNNTAGIQAQKHGYSRRQKEFYLL
PVVVEDSSYPIQSSTSTLTIRVCRCDSKGVVLSCNVEAIFLPVGLSTGALIAILLCIIIL
LVIVVLYVALRRQKKKDALMTSKEDIRDNVIHYDDEGGGEEDTQAFDIGALRNPKVIEEH
KVRRDIKPEHLCLPRQKPPSEFNTDIRDFINEKLQEHDADPNAPPYDSLATYAYEGTGSV
AETLSSIESQNMEMEQEYDFLSDWGPHFKSLAEMFGKENYNLDKIT
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttaaaaaaagttcaaagctggatcctacaattttgctgcccgtattggaat
tttaactacccggcagtagggaagtcttttccaatgcttacaaggaactccttatcgctt
cttctctggttcctttttgatggaggtcttttaacaccattgcagtcacagcagccacca
cagatttcatcaccgaagcagagagaaaatgctattatcacaatgccaggaagaagatca
gccgctcagcgagttaaacggggatgggtatggaatcagttcttcgtgcttgaagaatat
atgggttctgagccacagtatgtgggaaagcttcattctgacttggacaagggaataggg
tcagtaaagtatactctactaggcgatggcgctggaacaatctttacaattgatgataca
acaggggacatccatgcaattaaaagcttggacagagaagaaaagcccttctacacatta
cgtgcacaagctgtggatatagttactggaaaacctgtggaaccagaatctgaatttatt
atcaaagtgcaggacattaatgataatgagccaaaatttcttgatggtccttatgtagcc
agtgttcctgaaatgtctccagttggtgcttatgtgcttcaggtgaaagcgacagatgca
gatgacccaacatatggaagcagtgcaagagtggtttacagcattcttcagggacagcct
tacttttctattgatcctaagacaggagtcatccgaacagcattaccaaacatggacaga
gaagtgaaagaacaatatcaagtactaatccaagcaaaggacatgggaggacagctggga
ggattagcaggaaccaccactgtcaatatcactctcacggatgtcaatgacaatccaccc
cgcttccccaagagtatatttcatttaaaagtaccagaagcttctccagttggatcacca
attggaaaaattcgtgcagttgatcctgattttggaagaaatgcagaaattgaatacagc
attgttccaggagatggaggaaatctgtttgatatcaaaacagatgatgacacacaagaa
gggattatttttcttataaagccacttgactttgagaccaagaaagcatatacatttaaa
gtcgaagccaccaatgttcatctggaccaccgattcaactctgttgggccatttaaagat
attgccactgtaaaaataaatgttttagatgtcgatgaacctcccgtttttagcaaacct
ttctatacgatggaggtatatgaggacacccccactggcacaattattggagctgtaaca
gcacaagaccttgatattggaaccagtccgattcaatattctattgatgcccagactgat
gctgacaacaactttgtagtggatgccaatgagggaactgtggcaacgaatgcattgtta
gaccgggaaagtactgcacaatttaacatatctattattgcaagtaaagttaacaatcct
caattggccagcctagtgaaaatcatcataaatgttttggatatcaatgaatttccacca
gaagtatatttgccctatgagacatcagtctgtgaaaatgcgaaaccaggacagatcatc
caaattattggtgccgttgacagggatatgtcaccagcaggacagattttttccttcaga
cagccacctgattcttcagcaaaccccaattttaccatccatgactacaaaaataacaca
gctggaatacaagcacaaaagcatggatacagccgtagacagaaagaattttatctcctc
ccagtggttgtagaggacagcagttatcctattcaaagcagcacaagcacattgactata
agagtttgcagatgtgattctaaaggtgttgttttgtcttgcaacgttgaagctattttt
ttaccagtagggttaagcactggtgctttaatagcaatcttactgtgcatcattatactt
ttagttatagttgtactttatgtggcattaagacgacagaaaaagaaagatgcccttatg
acctcaaaagaagatataagagacaatgtcattcattatgatgatgagggtggtggcgaa
gaggacactcaggcatttgacattggtgcacttagaaatccaaaggtaatagaagagcat
aaagttcgcagagacataaagccggaacatctttgtttgcctcgtcaaaagccaccatca
gaatttaacactgacattagagattttattaatgagaagctacaagagcatgacgcagat
ccaaatgcgccaccatatgactcattagcaacatatgcttatgaaggaactggatctgta
gctgaaactctgagttcaatagagtcacaaaatatggagatggaacaggaatatgatttt
ttaagtgactggggacctcattttaaaagcttggcagaaatgtttggaaaagaaaattat
aatctggacaaaataacttaa
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