Xenopus tropicalis (tropical clawed frog): 100489858
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Entry
100489858 CDS
T01011
Name
(RefSeq) signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100489858
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100489858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100489858
04090 CD molecules [BR:
xtr04090
]
100489858
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
SLAM/CD2 family
100489858
CD molecules [BR:
xtr04090
]
Proteins
100489858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
SLAM
ig
Receptor_2B4
V-set
G8
Motif
Other DBs
NCBI-GeneID:
100489858
NCBI-ProteinID:
XP_031748207
UniProt:
A0A8J1IRI3
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All DBs
Position
8:133665637..133684114
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AA seq
350 aa
AA seq
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MCAFICLLFLLSLHYGSTDYNGHDKEYETIEGTIGKPLDLPANITKPNQKHWLRKMMDDG
RRKKILQYDPQNKNKSVFDADLFRFNVSKMEFEIVKVQREHEGRYIITEDGDTEFDLAKY
YIKVYEQISRVSIGLAENPINESCVITLNCTTQEGDHVMYNWSQNQKYLKHNSSVLQVTL
SPSTANVSYTCRASNPVSQGVSSITPLVARCSTTPEERWDTLLIVVLAILLPALVLLVLI
GKYIQVYCATEKGSFSLDPQRPHPVPGPVPEPVQTTHTVYATVQKGSFSLDPQRPHPVPG
PVPEPVQTTHTVYATVQKVQAPVNLPTTEHCTIYELAGPVGNQSHQTTVP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccttcatctgcctcctcttcctcctctctctgcactatggatccactgattac
aatggacatgacaaggagtatgagacaatagagggaaccattggcaagcctctcgacctt
cctgctaacatcacaaagcccaatcagaaacattggctgaggaaaatgatggacgatggg
cgcaggaaaaaaatattacagtacgatccccagaacaagaacaaatcagttttcgacgct
gatttgttcaggttcaatgtcagtaagatggagttcgagattgtgaaggtacagagagag
cacgaggggcgctatatcattacggaggatggagatacagagtttgatcttgccaaatac
tatatcaaagtttacgaacagatcagcagagtttccattgggctggctgagaacccaatc
aatgagagctgtgtgatcacgctgaactgtacgacgcaggaaggagaccacgtcatgtac
aactggagccaaaaccagaaatatttaaagcacaacagcagcgtgttacaggtcactcta
tcgcccagcactgccaacgtctcctatacctgcagagccagcaatcccgtcagtcagggc
gtcagttccatcaccccccttgtggccagatgcagtactaccccagaggaaagatgggac
acactcctaattgtggttcttgcaattcttttgccagctcttgtgctgttagtacttatt
ggcaaatacatacaggtatattgtgcaacagagaaaggatcattttcattggatccgcaa
aggccacatccagtgccggggcctgttccagaacctgtgcaaacaacacatacagtctat
gctactgttcagaaaggatcattttcattggatccgcaaaggccacatccagtgccgggg
cctgttccagaacctgtgcaaacaacacatacagtctatgctactgttcagaaagttcag
gctccggtgaatttaccaactacggaacattgtactatatatgagcttgcaggcccggtg
gggaatcagtcacaccagaccacagtaccctga
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