Xenopus tropicalis (tropical clawed frog): 100489865
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Entry
100489865 CDS
T01011
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100489865 (cdan1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100489865 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
IL10
O_Spanin_T7
Motif
Other DBs
NCBI-GeneID:
100489865
NCBI-ProteinID:
XP_002941131
Xenbase:
XB-GENE-1013862
UniProt:
A0A6I8QII0
LinkDB
All DBs
Position
8:105912066..105948461
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AA seq
1312 aa
AA seq
DB search
MAAVLELLLQEQLTVDAVLRWVMSTSQEKPAPPSLASLSLLQKDFVPFLLNFLREQTSQI
LTNGPSTPAKTPTSKTVSKSSSTTHQRTVSEKRASNSSGHRGSRMQLFAHTPNSSNASNT
SNSCFLSPTSVSNDSSFLSRSNLTANLSGKHSVSTSPNLGCSPLMHYSEKRSAHKPSLGN
FLVLTPDGQPPRRGRKKNNSSGRQISRDQGRRSNEEEIQGDVSWSANRRIQGGSDSVTSP
PGVCQLNLNNLDEFPPMNASAGSTSKSKPSRRINPTPINDVHLISKSRVCFTSTPIRQST
INQHQAGMDVFTNVKEGNCSPAKGGSLHEEREILKKERSKLMQQTSSPIVLDPVTPTKSY
SRNMSISADTLVNADSAKVTYRKQLNILAELYSACIAENLVPNIFLEFFFVLQLLTSRGH
AADGECDSDVTCNIKDVVEQPYFQSVHNCVFFAVVVLDFQFPVISHLDKGTLKLLSENER
ISAFSSALHERLLKAYENSTAKVSLFLPPAIQSVSFQPETDNRSNFTSDRAFHIFKKQRD
VFYELLREWEDKHRKADWDFERCLGSRIRGMMSSLSAVCNQSHFARLFQKQLVQMCKGPS
GGIGSSSAGDNPDQDVLNVVGSDNLNRLKRLQERFVTPQSICGPCPPPCFPGYQEFFRDF
ILCAGNYHFNQHLMDSLCQEIKELDGISIIGHEPADGESDMDEQDEKIRFASVIMTLRLL
AKFLGFIYFLPYRTTETLTSELQESALALRNQTLPMLDVLQLLRRSMQNYRIVLTVPWVV
EYLSLVDQVAPLLDYYKKVFALLMHLYRYKLILAEEREMGFLNKLLILAALGWLFQVPPV
PEELFFDNDNVEADFAVGSVAVTQGLDSMPLVDQQLLYSCCPYLGELKKLLLSFVAGSSA
KNGGFLRKITPTAAEPLIPKPTLSQKKLQAELEQAFFHNQSPSLRRTVEFVAERIGSNCV
KHIKATLVAELVKRAELLLQDSVTEDSSTHSKQLETVCTKLCEDGRQAVQKGKEYCTKKV
PEALRVLLPEEISASVLNSAEDIAVALAIEKACSWLRANISALIKREVKAAFARMVKIHS
QMSSSIGGENVKGGCMDGCNHKAPLPSQLITEIKDILSISVGPRDEEEQVDYKHLKNTLA
HLSQTLRCRIYMCYPAEQHLAKSTVELASLLVSDRIPVFGLPSCENSNEMQKSKREALCD
LLTLLLSVWKKDFRVTIPFYLMFSMKNITYITDIQAHKWELFEFMLHGLIEQRLMVFEEI
KHHIDQLKGFIWPAGLLEKLALMSERHRSKQEDGCKEPVCTPVPKAAITSHS
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgttggagttgttgctgcaggagcagcttacagtagacgcagttctgcgc
tgggtaatgagcacttcgcaggagaaacctgcacctcccagtcttgcctccctcagtcta
cttcagaaagactttgtcccatttcttcttaattttttacgtgagcagactagtcagatt
ctgactaatggaccctctactccagcaaagaccccaacctctaagactgtatcaaagtcc
agtagcaccacccaccaacggacagtttcagagaagagggcctctaattcatcaggtcac
cgtggaagccggatgcagctttttgcccatactcctaatagctcaaatgcatcaaataca
tcaaatagttgttttttgtctcccacttctgtctccaatgactcttcttttttgtccaga
tcaaacctgactgctaatctgtctggaaaacattctgtttcaactagtccaaaccttggc
tgcagcccattgatgcattacagtgaaaaacgttctgcacacaaacccagcttgggaaac
tttttggttcttacacctgatgggcaaccacctcgacgtggtcgtaaaaagaataacagc
tctggtcgccaaatatccagagaccagggaaggagatcaaatgaggaagaaatccaggga
gatgtttcatggagcgcaaacaggagaattcaaggaggctctgactctgttacatctcct
cctggtgtttgccaactaaatctcaataacttggatgaattccctccaatgaatgcttca
gctggatctaccagcaaatctaaaccatccagaagaatcaaccctactccgatcaatgat
gtacacttgatatccaaatccagggtctgcttcacttccacaccaatacggcagtccaca
ataaaccaacaccaggcaggcatggatgtgttcactaatgttaaagaaggaaactgttct
cctgcaaagggcggaagccttcatgaagaaagggagatattaaagaaggaaagatccaaa
ttaatgcagcagacaagctctccaattgtattggatcccgtaactcccaccaagagctac
agccgaaacatgagcatatctgcagataccctggtcaatgcagacagtgccaaggttaca
tacaggaagcagctgaacatccttgctgagctctattcagcttgtatagcagaaaatctt
gtgcccaatatattcctggaattcttttttgtcctgcagctgctcacatcaagggggcat
gctgcagatggagagtgtgattctgatgtaacatgcaacattaaagatgtagtggagcaa
ccttactttcaaagtgttcacaattgtgtattctttgctgtggtggtccttgattttcag
tttccggtcatttcacatttggataaaggaactttgaagcttctttctgaaaatgaacgt
atttcagcattttcatctgcattgcatgagcgacttctgaaagcctatgaaaacagtact
gccaaggtttccctctttcttccacctgccatacagtcagtgtcgtttcagcctgaaact
gataacaggtctaactttacaagtgaccgggccttccatatctttaaaaaacagagagat
gttttctatgaattgctgcgagagtgggaagataaacatagaaaagcagattgggacttt
gagcgttgccttggcagtaggataagggggatgatgtccagtctttctgcagtatgtaac
cagagccactttgctagattatttcagaagcagcttgtccagatgtgtaaagggcccagt
gggggtattggcagctccagtgctggtgataacccagatcaggatgtgctaaacgtggtc
ggctcagacaatctgaacagacttaagcgcttgcaggaaagatttgtgaccccccagagt
atttgtgggccgtgcccacctccatgcttccctggttaccaggagttcttcagagacttc
atactctgtgctggaaattatcattttaatcaacatctgatggacagcctgtgccaagag
ataaaagaactggatggcatctctattattgggcatgagccagctgatggagaatctgat
atggatgagcaggatgaaaaaattcgttttgcttctgtcatcatgacccttcgtctgctg
gcaaagtttctgggatttatatatttcttaccgtacagaacaacagaaacgctcaccagt
gaactgcaagaatctgccttggctttaagaaaccagactttacccatgctagacgtgttg
cagctgctgaggcgttcaatgcagaattaccgtattgtgctgactgtcccatgggtagta
gaatatttgtcattagtggatcaagttgctccccttctggattattacaagaaagtgttt
gcactattgatgcacctgtacaggtacaagctgatccttgctgaagagagagaaatggga
ttcctgaataagttgcttattcttgctgcattgggctggctttttcaggtacctccagta
ccagaggaactgttttttgacaatgataatgtagaggcagactttgctgtgggctctgta
gcagtgacacaggggctggactccatgcctttggtggaccaacagctgctgtatagttgt
tgcccatatctgggagaactgaaaaagttactgttatcatttgtggctggtagcagtgcc
aaaaatgggggttttctgaggaaaataactcccactgctgcagagcctcttatcccaaag
cctaccttatcacaaaaaaaacttcaggccgaactggagcaagcattcttccacaatcag
tcgccctctcttcggagaacagtggagtttgtggcagaacgaattggttccaactgtgta
aagcacatcaaggccactcttgtggcagaacttgtgaagagggcagagctcctcctgcag
gatagtgtgacagaggacagttctacccacagcaagcagcttgagactgtatgcaccaag
ctctgtgaagatggcaggcaggcagtgcagaaaggcaaagagtattgcacaaagaaagtt
ccagaggcccttcgagttctgttgcctgaggagatatctgcatctgtgctgaatagtgct
gaggacatagcagtggccctagctatagagaaggcatgctcctggctacgtgccaatata
tcagcattaataaaaagggaggttaaagctgcatttgctcgaatggtgaaaatacacagc
cagatgtcctcatcaattggaggtgagaatgtaaaaggaggctgcatggatggctgtaac
cacaaggctcctctcccctcccagctgattacagaaataaaggatatcctgagtatttca
gttgggcctcgtgatgaagaagagcaagtggattacaagcacctgaaaaacacccttgca
catctgtctcagactttgagatgcagaatatatatgtgttacccagcagagcagcacttg
gccaagagcaccgtggaactggcatctttgttagtttctgatagaattccagtatttggg
ttgccttcatgcgagaatagtaatgaaatgcagaaatcaaagagagaagccttatgtgac
ctgctgacactgctgctttccgtctggaagaaagacttcagggtgaccattcccttttat
cttatgttcagcatgaagaatataacctacataacagatatacaggcccacaagtgggag
ttatttgagttcatgctacatggacttattgagcagaggcttatggttttcgaagaaata
aaacatcacatagaccagcttaaaggattcatttggccagcaggtttgctggaaaaactt
gcactcatgtctgaaaggcacagatccaagcaggaagatggctgtaaggagccagtatgc
acccctgtgccaaaggctgccattacttctcacagttag
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