Xenopus tropicalis (tropical clawed frog): 100489961
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Entry
100489961 CDS
T01011
Symbol
katnal1
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1 isoform X2
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100489961 (katnal1)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100489961 (katnal1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100489961 (katnal1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_5
AAA_33
AAA_14
Mg_chelatase
AAA_22
AAA_16
NPHP3_N
AAA_7
AAA_28
TsaE
AAA_2
IstB_IS21
AAA_18
AAA_17
nSTAND3
RNA_helicase
ORC-CDC6-like
NACHT
AAA_24
Parvo_NS1
PhoH
Zeta_toxin
SRPRB
AAA_25
Motif
Other DBs
NCBI-GeneID:
100489961
NCBI-ProteinID:
XP_002934061
Xenbase:
XB-GENE-984420
UniProt:
A0A8J0QN38
LinkDB
All DBs
Position
2:154222722..154256801
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AA seq
487 aa
AA seq
DB search
MNLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIQKHFQTIRDPVVKVKWQQVCQELV
EEYEQVKSIVSTLESFKIEKPAEFPVAVAEEPVKDPAVWPPPVPAEHRAPPQVRRPNREV
KPLRKESPGIQPHGPVGRAQPISKSDRPSNRDGRVRGKDDKGRKNQQDAGADGELKKFDG
AGYDKDLVEALERDIISRNPNVHWEDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKG
VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTT
IFIDEIDSICSRRGTSDEHEASRRVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWD
IDEALRRRLEKRIYIPLPTANGRAELLKINLREVELEPSVDLEVIAQKIEGYSGADITNV
CRDASMMAMRRRIQGLTPEQIRALSKDELQMPVTVMDFELALKKVSKSVSAADLEKYEKW
MAEFGSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagcagaaatatgcgataatgctaaaaagggaagagaatatgctctccttgga
aattacgattcctccatggtgtattaccagggcgtaatccagcagattcagaagcacttt
cagacaatacgggacccagtggtgaaagtgaagtggcaacaggtatgtcaggaattagtg
gaagagtatgagcaagtgaagagtattgttagcaccctggaatcctttaaaattgaaaaa
ccagcagagttcccagttgcagtagccgaggaacctgtcaaggacccagcggtttggcct
cctccagttccagcagaacacagggctcctcctcaagtcagacgacctaacagggaggta
aagcccctgaggaaggaatctccaggaatacaacctcatggacctgtcgggagagcacag
cccatatcaaaaagcgataggccctcaaacagagacggcagagtgcgaggtaaagatgat
aagggaaggaaaaatcagcaagacgctggggcagatggagagctaaagaagtttgatgga
gcaggttacgacaaggatctggtggaggccttagagagggacattatctccaggaatcct
aatgtacattgggaagatatcgctgatctggaagatgcaaagaagttactgagagaagca
gttgtactgccaatgtggatgcctgacttttttaaaggcatcagaagaccatggaaaggt
gttctaatggttggacctcctggaacaggcaaaaccatgcttgctaaagccgtagccaca
gaatgtggaacaacattttttaacgtgtcttcttcaacattaacgtctaagtacagggga
gagtctgagaagctggtccgcttattatttgaaatggcaagattttatgcaccaactaca
atttttattgatgaaattgattccatctgtagccgcagaggaacgtctgatgagcacgaa
gcaagtcggcgggtcaagtcggaactgctcgttcagatggatggtgttggaggcgctcta
gaaaatgatgatccttcaaaaatggttatggtgttggctgccacaaatttcccatgggac
attgatgaggctttacgaaggagattagaaaaaaggatctatattcccttacctacagct
aatggaagggcagagctgctgaaaataaatctacgggaagtagagttggagccgagcgtc
gaccttgaagttattgctcagaagattgaaggctattccggagcagatataaccaatgtt
tgcagggatgcatccatgatggcaatgagacgccgtatccagggtttaaccccagaacag
atccgggctctgtccaaggatgagttgcagatgcccgtgaccgtgatggactttgaacta
gcgctaaaaaaagtatccaagtcggtctccgctgcagatttggaaaagtatgaaaaatgg
atggctgaatttggttctgcctaa
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