Xenopus tropicalis (tropical clawed frog): 100489975
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Entry
100489975 CDS
T01011
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1 isoform X1
KO
K24993
paraspeckle component 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100489975 (pspc1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100489975 (pspc1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
100489975
NCBI-ProteinID:
XP_002938004
Xenbase:
XB-GENE-492866
UniProt:
A0A6I8RVT2
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Position
2:complement(158659839..158717463)
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AA seq
517 aa
AA seq
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MANRNLKQVHIEKNNGGGGEMLSPPSGKGSKRSFEVAEGDPSLMPPKMEDGEEERGVTID
IKSFLKPGEKSYTQRCRLFVGNLPTDITEEEFKKLFEKFGEPSEVFINRDRGFGFIRLES
RTLAEIAKAELDGMILKNRPLRIRFATHGAALTVKNLAPVVSNELLEEAFSMFGPVERAV
VIVDDRGRPTGKGFVEFAAKPAARKALERCTEGAFILTTTPRPVIVEPMEQFDDEDGLPE
KFMQKTQQYLKEREEPPRFAQPGTFEFEYSSRWKALDEMEKQQRDQVDRNIREAKEKLEA
EMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQFQMRHEEEQRRREEELMRQ
RDQDDLRRQEGFKTNYMDTREQDMRMGDMGVRGAINMGDTYSPATAGTQGPPPMMGMNMN
NRATVPGPTMGPSATMGAEGTTSLGAPMIPDNGSVRNDRFSQASPSQMGSPMVNRAGTEA
AQPAMGGVNAVGGGGPGGFGRGNQGGNFDGSNKRRRY
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgtaacctgaaacaggtccacatcgaaaagaacaatggcggcgggggcgaa
atgctctcgcccccctcaggaaaaggcagcaagcgcagttttgaggtggccgagggggac
ccgtctctgatgcctcccaagatggaggatggagaggaagaaagaggggtcactatcgat
atcaagagctttctgaagcccggcgagaagagctacacccagcgctgccggctctttgtt
gggaacctgcccaccgacatcacggaggaggaattcaaaaagctctttgagaaattcggg
gaacccagcgaggtgttcatcaaccgggaccggggcttcggcttcattcgcctggaatca
agaaccctagcagaaatagccaaagctgaacttgatggaatgattcttaaaaacagacct
ctgcgaattcgatttgctacccacggggctgcactaactgtgaaaaatctcgcccctgtg
gtttccaatgagttgctcgaagaagctttctccatgtttggcccagtggaaagggctgtt
gtcatagtggatgaccgtggaaggccaactggcaaaggctttgttgaatttgcggcaaaa
ccagcagcaagaaaggctttagaaagatgcactgaaggagctttcatattgacaacgacg
cctagaccagttattgtagaaccaatggaacaatttgatgatgaagatggattacctgag
aaatttatgcagaagactcaacaatatcttaaggaaagggaggagccaccacgctttgct
caaccaggcacgtttgagtttgaatattcctctaggtggaaagctctggacgagatggag
aagcagcagagagatcaagttgatcgaaatatcagagaagctaaagagaaattagaggct
gaaatggaggctgcgagacatgaacatcagctgatgttaatgcggcaagatttaatgaga
cgtcaagaagagttacgaagattggaggagttgaggaatcaggaactacaaaagcgcaag
cagtttcagatgaggcatgaagaagagcagagacgtcgtgaggaagagcttatgaggcaa
cgtgaccaggatgatctgaggcggcaagagggatttaagactaactacatggacactaga
gaacaggatatgagaatgggtgatatgggcgtccgtggagcaataaacatgggagatacc
tatagcccagcaactgctggtacccaaggtcctcctccaatgatggggatgaatatgaac
aacagagcaactgtgcctggccctacaatgggtcctagtgctacgatgggagctgaagga
actaccagtctgggagcaccaatgattccggataatggatcagtgcgcaatgatagattc
tcgcaggcctcaccatcacagatgggctcccccatggttaacagagcaggaactgaagct
gctcagccagcaatgggtggtgtaaatgcagttggtggtggaggaccaggtggctttggt
agaggaaatcaagggggaaactttgatggatctaacaagcgacgacgttattag
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