Xenopus tropicalis (tropical clawed frog): 100490066
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Entry
100490066 CDS
T01011
Symbol
ifit1b
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100490066 (ifit1b)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
100490066 (ifit1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_14
TPR_8
TPR_19
TPR_11
TPR_1
TPR_12
TPR_16
TPR_7
ANAPC3
TPR_MalT
ARM_TT21_5th
TPR_CcmH_CycH
ARM_TT21_4th
NatA_aux_su
TPR_20
TPR_Slam
DUF3856
TPR_15
TPR_9
TPR_NPHP3
RPN7
HAT_Syf1_M
TPR_5
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
100490066
NCBI-ProteinID:
XP_031762101
Xenbase:
XB-GENE-5999398
UniProt:
A0A803JDK1
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All DBs
Position
7:36277181..36282824
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AA seq
449 aa
AA seq
DB search
MSESQPTLMCRLEELKCHFTWGLQEKDADIEELEERLNCQLEYLNVDAKGRVYNMLAYVN
HMKNDYTEAIVNLQKAEGILWEYKVLETDVKYLLTFSNYAWLHYYLNDSESSQLYIDKIN
AIYTQSKGLEDLVQSETNGEQGWALVNFCGQYYERAKDCFEEAVKGNPDDPEWNTGLATV
VYRLEEFRGRNCPAFKSVSFQLLERAVKLNPKDSVIKVLLALKLQELKRQEEAMKHIMDA
LELTPDLPYVLRYVAKFYRRAGKFEEAIRVLTKALSMTPNSGFLHHQLGLCYRQMIIQRK
GTGNGNCRGQDTQEIKDLTEKAIFHFEKVVELKKTFLHAHFDLADMYVRSNQYQKAEETY
KKATELTTTTKYEKQITHLNYGKFLETWKKSEGEAVEQYKEGLRIPDQNEYRQQCEMSLR
RIANQRLARNPSDASGIAWLGMISKENQD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcacagcctacactgatgtgccgtttagaagagctgaaatgccactttaca
tgggggctacaggagaaggatgctgatattgaagaactagaagaaagacttaactgtcaa
ctagaatatttgaatgtggatgctaaagggagagtgtataatatgctggcctatgtaaac
cacatgaagaatgattatacagaggctattgtgaatctccaaaaagctgagggtattctt
tgggaatataaagtattggagaccgacgtgaaatatctgctgaccttctccaactatgca
tggctccattactacctaaatgatagtgaaagctcccagctctatattgacaagattaat
gctatttatacacagtcaaaagggcttgaagatcttgtgcaatctgagaccaatggagaa
caagggtgggctctggtgaatttttgtggccaatactatgagagagcaaaagactgtttt
gaagaagccgtgaaagggaatccggatgatcctgaatggaatactggactggccactgta
gtttatcggctggaggaattccgaggcagaaactgtcctgctttcaaaagtgtctcattc
cagctattggaacgggcagttaagctgaatccaaaggactctgtgattaaggtacttttg
gctttgaaactacaggagttaaagagacaagaagaggcaatgaagcatattatggatgcc
ctagaattaacaccagatcttccatatgtgcttcgctatgttgccaaattttacaggcga
gctgggaagtttgaggaagccatcagagtcctgacgaaggctttaagcatgactcctaac
tctggctttctccatcatcagctggggctgtgctacagacaaatgatcatacaaaggaag
ggaacaggaaatgggaattgcagaggtcaagacacacaagaaataaaggatctaactgaa
aaggccatatttcactttgaaaaggtggtggaattgaaaaagacatttctgcatgcacat
tttgatttagcagatatgtacgtcagatccaatcaatatcagaaagcagaggaaacctat
aaaaaggccacagagctaacaaccactactaaatatgagaaacaaataacacatttaaat
tatggaaaatttctggaaacatggaagaaatctgaaggcgaagctgtagaacagtacaag
gaagggctgcggattcctgaccagaatgaatacagacaacagtgtgagatgtctctgaga
aggatagccaatcagaggttagcgagaaaccctagtgatgcctcagggattgcttggctt
ggcatgatcagtaaggaaaaccaggactaa
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