Xenopus tropicalis (tropical clawed frog): 100490074
Help
Entry
100490074 CDS
T01011
Symbol
sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100490074 (sort1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
100490074
NCBI-ProteinID:
XP_017947027
Xenbase:
XB-GENE-982637
UniProt:
F7ACW9
LinkDB
All DBs
Position
2:complement(71412682..71445839)
Genome browser
AA seq
801 aa
AA seq
DB search
MSLPRGLNSRLAAILLWLLCDVSWGAYLADELDARPGLAALAARNRRSLEQNRTPAVDGT
CQEKWAFQGALENDTHTCQFDLSGELSLMWIGDGTGIILVLTTFRIPLFVMTYTQSKLYR
SNDYGKTFQDVTSLINHTYIHSEFGMAIGPDNSGKVILVADVSGGSKGGRIFRSSDSAQI
FVQTDLLFHPLVSVSYSTENSNFLLVLSVDFGLWISRDFGETWKEIHQSVCSAKWAAGNT
IHFTTARNNSCKADFRLMTLKRTSDFGQTFRVLKERVHSFGLWGRFLLASVVELDGLKRK
IHVSQNQGNTWNVAQLPAVTYEQFYSVLAATDDMVFIHVDDEGDTGCGTIYTSDDRGILY
SKSLERHLYTTTGGETDFTNVTSLHGVFITSVLSEDNSIHSVITFDQGGEWSPLRKPENA
QCDSTAKDKEQCSLHIHAQYSISQRLPVPMPPLSEPNAVGIVIAHGSVGDAVSVSRPGVY
LSDDGGYSWSRVLDGPHHYAILDSGGLIVAVEQNDDSVNTVKFSIDEGQCWFYYKFTNDS
FIFTGLASEPGALSLNVTIWGYQPGVIRHIWMSYTIDFAHLLHKDCEEKDYILWLAHSTD
PQAPLDGCVLGYKEQYFRLRKSSVCQNGRDYTVSKVHTPCACTLDDYMCDFGYYRNENES
ECVEQSELKGQELDLCVYGEEEKLTTSGYRKIPGDKCTGGVQFKRMEIDMKKKCLNVENT
EVHTSSLVLVFLSVAFVMLVAVIAVVLIIKKHVCGGRFLVHRYSILRQNMDSQGDDPLDS
DFGPPHRGSGFHDDSDEDLLE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacccagggggcttaatagccggctcgctgctattcttctgtggttgttatgc
gatgtgtcgtggggagcctatcttgcagatgaactcgatgcccgtccagggttggcagca
ttggctgctcgcaatcgaaggagcttggaacagaacaggacgccggcagtcgatggaact
tgtcaggagaaatgggcctttcagggcgctctggaaaacgatacacacacgtgccagttt
gaccttagtggcgaactttctctgatgtggattggtgatggaactgggattatacttgtt
ttgaccacatttcggatacccctgtttgtcatgacatatacacagtctaaactgtatagg
agcaatgattatggaaaaaccttccaggatgttacatctctcatcaaccatacttacatt
cattctgaatttggcatggctatagggcctgacaactctggcaaggtcatcctggttgct
gatgtttctggtggtagcaaaggtggccgtatattcagatcctcagactctgcacagatc
tttgttcaaacagatcttctatttcatcccctggtatcagtctcttacagcacagaaaat
tctaacttcctgttggtgcttagtgttgattttgggttatggatttcaagagattttgga
gaaacgtggaaggaaatccatcaatctgtgtgttctgcaaagtgggcagctggaaacaca
attcactttaccacagctagaaacaactcctgtaaagcagacttccgattaatgactttg
aagagaacatcagattttgggcaaacttttcgggtgctaaaagaacgtgtccactccttt
ggactgtggggtcgttttttgcttgcttctgtagtggagttggatggactaaagaggaaa
attcatgtttctcagaatcaagggaatacatggaatgtggctcagctgccagctgtgaca
tatgaacaattctactctgtgttggcagctaccgatgacatggtgtttatccatgtggat
gatgaaggagacactggatgcggtactatatacacatcagatgaccgcggtattttatat
tcaaaatcactggagcgccatctgtatacaacaacaggaggggagactgattttaccaat
gtgacatccttgcatggagtcttcattaccagtgttctttctgaagacaactctatccat
tctgtgatcacttttgatcaggggggtgaatggagtcccctaaggaagcctgaaaacgca
cagtgtgactcaacagctaaagataaggagcagtgcagtctacatatacatgctcagtac
agcatttcccagagattgccagtgcccatgccacccttgtctgaacctaatgctgtgggg
atcgtcattgctcatggtagtgtgggagatgcagtatcagtttctcgccctggagtgtat
ctttctgatgatggagggtactcctggagcagagtgctggatgggcctcaccattatgct
attctggattctggaggactcattgtggctgtagaacaaaatgatgattctgtcaacaca
gtcaagttctccatagatgagggccagtgctggttctattacaagttcacgaatgattct
ttcatatttactggcctagcatctgagccaggtgctctttctctgaatgtgaccatatgg
ggatatcagcctggtgttattcgccacatctggatgtcttacactattgattttgctcat
cttttacacaaagactgtgaagaaaaggattacattttgtggctggcacactcaactgat
cctcaggcacctttggatggttgtgttttgggatacaaggagcagtattttcggctacgc
aaatcttcagtgtgccagaatgggcgtgattatacagtgagcaaagtacacacaccttgt
gcttgcaccctggatgactacatgtgcgattttggttattatcgtaacgagaatgaatca
gagtgtgtggagcagtcagagctaaagggacaggaactggatctgtgtgtatatggagaa
gaagagaagcttaccactagtggttatcgaaagattcctggagacaagtgtactggagga
gtacaatttaagcgaatggagattgacatgaagaagaagtgcttgaacgtagaaaataca
gaggtgcacacttcaagtttagtactggtattcctctccgtggcttttgttatgcttgtt
gcagtcatcgctgttgttctgataattaagaaacatgtctgcggtgggaggttcctggta
cacagatattctattctgcggcagaacatggattctcagggtgatgatccattggactct
gactttgggccacctcataggggatctggtttccatgatgactcagatgaggaccttttg
gagtga
DBGET
integrated database retrieval system
