Xenopus tropicalis (tropical clawed frog): 100490088
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Entry
100490088 CDS
T01011
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100490088
Peptidases and inhibitors [BR:
xtr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
100490088
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
SR-25
Med10
Motif
Other DBs
NCBI-GeneID:
100490088
NCBI-ProteinID:
XP_002936803
UniProt:
F6TWH3
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Position
9:complement(68628992..68667958)
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AA seq
1224 aa
AA seq
DB search
MYLRLWWLLFLWDVQTYFAQNYFEERRVGRFRPKALTGNPEEKVSNLSEQDEDCILEMAF
LLDSSESAKDYNHNREKKFVLQMVDKLKEVKPNSGRSFSWRMALLQYSSTVVIEQTFRDW
KGPENFKSRIAPIAYIGHGTYTSYAITNLTQIYMNEGTHKSVKVAILITDGVDHPRNPDI
FAATSNAKHHDIKLFTVGMTSVAKETANNAKLRLLASVPATRFVFHMLDPDVVDKILKEV
KELAEEGCPRVCSCEKGERGLPGPAGKKGRPGDDGIPGPKGIKGEAGLNGIPGRDGLEGK
PGYKGEPGERGECGIPGIKGDRGPEGPTGPRGLRGIQGIQGPPGDQGPEGFQGSKGDRGI
SGLPGLPGETGIGLPGPKGDIGIQGRPGPSGPPGIGEPGPAGPQGSQGVPGERGTPGEGL
PGPKGDRGFEGPRGPRGQQGLGIKGDKGDFGPPGLPGPVGLTGAGIQGEKGIQGPVGPAG
MRGPPGEGLIGSKGEQGLPGESGVPGERGIGEPGAKGEPGSTGLAGLPGLPGEDGAPGQK
GEPGLPGLRGPEGSPGIGIQGEKGDQGQRGIRGLTGPPGPSGPSGPKGEPGAPGRLGMPG
LPGRAIVGPKGDLGLPGPQGLIGEPGIGIVGPKGDRGGPGPPGPFGPKGDGYPGLPGMPG
MPGPQGEPGPEGIGLPGSKGDQGARGPLGLPGPPGEGLLGPKGNQGKTGLPGQQGPPGEG
IQGPKGEQGIHGGPGPRGPPGEGLLGPKGDRGAPGERGRKGDKGDIGESGAPGEVGRPGV
KGEVGLTREDIIKLIKEICGCGVKCKEIPMELVFVIDSSESVGPENFEIIKDFVTALVDR
VTVGRNATRIGLVLYSLDVQLEFGLNRFTTQQDVKQAIRKMMYMGEGTYTGTAIRKATQE
GFFGARTGVRKVAIVLTDGQTDKRESVKLDIAVREAQAANIEMYAIGIVNASDPTQVDFL
RELNLIASDPDSEHMYLIDDFNTLPALESKLVNQFCEDENGALIYNRIGSTINSMVMQKG
SLSSTHSISQINRERYNLYNRQIELENEKKTAQTEEKYQPQPQPTIVIKLQEEEEEDYDE
EEEESENITGGLDTRGTVISSSTQTSSSSQSSSSSSSSSSSQSSSSSTQPISTSKSTSTV
ILSPSGSSVLIEPSVPKTVFIQDARCTLILDQGPCRTYIIKWYYDKQANSCAQFWFGGCN
GNSNRFDTEEECKKICVFNGEGEI
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtacctccgactttggtggctcctatttttatgggatgttcaaacatattttgcacag
aattattttgaagaaagaagagttgggagatttcgtcccaaagctttgactggaaaccca
gaggagaaagtctccaacctcagtgagcaagatgaagactgcattctggaaatggccttc
ttactggacagttcagaaagcgccaaggactacaaccacaatagagaaaaaaagtttgtg
ttgcaaatggttgacaagctgaaagaagtgaagccgaattctggccgttctttcagctgg
cgaatggcactgctacaatacagcagcaccgtggtaatagaacaaacgttcagagactgg
aaaggcccagagaacttcaagtcccgtatagcaccaatagcatacattggccatggaaca
tacacatcctatgccataacaaaccttacccaaatctatatgaatgaagggacacataaa
agtgtcaaagtagccatccttataacagacggagtcgaccatccaagaaaccctgatatt
tttgcagccacatcaaatgcaaaacatcacgatatcaagcttttcaccgtgggaatgact
tctgtagccaaagaaacagccaataatgcaaaactcagattgctggccagtgtccctgct
acaagatttgtgttccatatgctggaccctgatgtggtggataaaatcctgaaggaagtg
aaagaacttgcagaggaagggtgtccccgagtctgctcatgtgagaaaggagaaagagga
ctcccagggcctgcaggtaaaaaaggacgaccaggtgatgatggcatccctggaccaaag
ggaataaagggtgaagctggactaaacggaattcctgggagagatggacttgaggggaag
ccggggtacaaaggagagccgggtgaaagaggggaatgtggaataccaggcataaaagga
gacagaggtccagagggtccaactggccctagaggattaagaggtatacagggaattcaa
gggcctccaggtgatcagggaccagaaggctttcaaggatcaaagggtgacagaggcata
tcgggccttcctggattacctggagaaactggaattggattgcctggtcctaagggtgat
attggaatacaaggccgacctggcccaagtggacctccgggaattggagaaccaggacca
gcagggcctcaaggatcacaaggtgttccgggagaaagaggcacaccaggggaagggctg
cctggaccaaagggagaccgaggatttgaagggcccagaggaccacgtggtcaacaagga
ctcggcattaaaggtgacaagggggactttggacctcctggtttgcctgggcctgttggt
ttaactggtgctggaattcaaggagaaaagggaatacaaggtcctgtaggaccagctgga
atgaggggaccaccaggagaaggattaataggatccaagggtgagcaaggcctacccgga
gagtctggagtacctggagaacgagggattggtgaaccaggcgccaagggagaaccgggg
tctacgggattagctggattacctggtctacccggtgaggacggagcccctggacaaaag
ggggagccagggctgccaggtctcagaggccctgaagggtcccccggcattggcatacaa
ggtgaaaagggtgaccaaggtcagcgaggtattcgtggattgacaggaccccctggaccc
tctggcccatcaggaccaaaaggtgaacctggtgccccaggacgtctcggaatgccgggt
cttccaggtcgcgctattgttggtcctaagggtgaccttggccttccagggcctcaggga
ttaataggggaaccaggcattggcattgttggtccaaagggtgacagaggtggcccagga
ccaccaggaccatttggaccaaaaggagatggttacccaggtctacccgggatgcctggg
atgcctggacctcagggagaacctggacctgaaggaatcggacttccaggatcaaagggt
gatcaaggtgcaagaggacctttaggtcttcctggtcccccaggagaaggattattagga
cctaaaggtaatcaagggaaaacaggattgcccggtcaacaaggtcccccaggggaaggt
atacaagggccaaagggagaacaaggaattcatggaggaccaggcccccgtggacctcca
ggagaaggacttctaggtcccaagggtgatcgtggtgctcctggtgaaagaggaagaaaa
ggagataaaggtgacattggagaaagtggagctccaggggaagttgggagacctggcgta
aagggagaagttggactaacgagagaagatatcattaagttaatcaaggaaatctgtggc
tgtggtgttaagtgcaaggagatccctatggagctggtgtttgtaattgatagctctgag
agcgtggggcctgaaaactttgaaatcatcaaggactttgtgacagctctggtggacagg
gtgaccgtgggcagaaatgccactcgcattggactcgtcctctacagtttggatgtccaa
ctagaatttgggctgaacaggttcaccacccagcaagatgtaaagcaagccataaggaag
atgatgtacatgggagagggcacatacactggcacagctatacgtaaagcaacacaggaa
ggtttttttggagctagaacaggagtgcgaaaagtggccattgtactaacagatggacag
acagacaagagagaatcggtgaagttggacattgctgtccgcgaggctcaagctgctaac
attgaaatgtacgccattggaattgtcaatgcgtctgaccctacacaggtcgacttcttg
cgggagctgaacctcattgcttctgaccctgacagtgaacacatgtatctgattgatgat
ttcaacacccttccagctctggaatccaaactggttaatcagttctgtgaagatgagaac
ggagctcttatttacaacaggattggaagtacaataaattcaatggtcatgcaaaaggga
tctcttagttccactcactcaataagtcaaatcaacagggaaaggtacaatctatacaac
agacagattgaactggaaaatgaaaagaaaacagcacaaacagaggagaagtatcaaccg
caaccccaaccaaccatagtaattaaactgcaagaggaagaggaggaggactatgatgaa
gaggaagaggagtcagaaaacattacaggtggtttggacacaagaggaacagtaatatca
tcttccacgcaaacatcttcatcatctcaatcatcgtcatcttcatcttcttcgtcatca
tcccaatcttcctcctcatccacgcagcccatatcaacatccaaatccacatcgacagtg
atattgtcaccatcgggttcctctgtgctcattgagccatcagtacctaaaacagtattc
atccaggatgcacgatgtactctgattttggaccagggtccatgccgaacatacatcatt
aaatggtactatgataaacaagccaattcctgcgctcagttctggtttggtggctgcaat
ggaaacagtaatcgttttgatacggaagaagagtgcaagaaaatctgtgtgttcaacgga
gagggagaaatctaa
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