Xenopus tropicalis (tropical clawed frog): 100490104
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Entry
100490104 CDS
T01011
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
xtr03012
]
100490104 (abcf1)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100490104 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_14
RsgA_GTPase
NACHT
ABC_tran_Xtn
AAA_22
AAA_15
AAA_24
AAA_5
nSTAND3
AAA_16
AAA_28
MMR_HSR1
AAA_23
AAA_25
cobW
NB-ARC
AAA
ATP-synt_ab
AAA_18
Motif
Other DBs
NCBI-GeneID:
100490104
NCBI-ProteinID:
XP_002939514
Xenbase:
XB-GENE-993168
UniProt:
A0A8J0QVA8
LinkDB
All DBs
Position
8:75348877..75382162
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AA seq
884 aa
AA seq
DB search
MPRGGKHEVGEEEEEEEVKGKETEKVVKKGKKDKKGKKSFFEELSADNKQAQEEEAAKER
EKEKELQQQQQKKREKKKKDRRKQKGDEDDDDEEKKEREIAERLKKLSVQASDEDEEPDV
KPAPKAGKKQGSNIFAALVEDQSDDEEEEEQVSNQVDEKKQSKGKKNVKGKHKAPEERPE
SEEDIPKEKSKGKKPVPSAASVNEEDEKKTEKGNKKSKPSQKPVSKAASVESDEEKKPEK
GSKKTKPSQNRFGALDIEEDHVSGGSKEGSGDEGETEDKTTAAEDPFANLSKKEKKKKKK
MLEYEKQVATMKKITAAENDFSVSQAELSSRQAMLENASDIKIEKFSISAHGKELFVNAD
LYVVAGRRYGLVGPNGKGKTTLLKHIANKALNIPPNIDVLLCEQEVVADDTPAVQAVLKA
DKKRLKLLEEERKLQTRLEKGDDNAAERLEKVYEELRAMGAASAEAKARRILAGLGFTPE
MQDRETRRFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWKKTLLI
VSHDQGFLDDVCTDIMHLDSQKLYYYRGNYMTFKKMYQQKQKELQKQYDKQEKKLKDLKA
GGKSAKQAEKQTKEALTRKQQKCQKKNNDKEDNDPVELLKRPKEYTVKFTFPNPPPLSPP
ILGLHGVDFCYSGQKPLFKNLDFGIDMDSRVCIVGPNGVGKSTLLLLLTGKLTPTKGEMR
KNHRLKIGFFNQQYADQLNMEETATEYLQRNFNLPYQDARKCLGRFGLESHAHTIQICKL
SGGQKARVVFAELCCREPDVLILDEPTNNLDIESIDALAEAVNEYKGAVITVSHDARLIT
ETNCHLWVVEDQTVNQIEGDFDDYKREVLESLGEVIVNKPRERD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcggaggaaagcatgaggttggagaagaagaggaggaggaggaggtgaaaggg
aaggaaacagaaaaagtggtgaagaaaggaaaaaaggacaagaaagggaaaaaatcgttt
tttgaggagctgtctgctgataacaagcaggcacaggaagaggaggctgcgaaggaacgg
gaaaaggaaaaggagttgcaacagcaacagcaaaaaaagagagaaaaaaagaaaaaagat
cgtcggaagcaaaaaggagacgaagatgatgatgatgaagaaaagaaagaaagagaaatt
gcagagaggctaaaaaagctgtcagtgcaagcaagtgatgaagatgaagaaccagatgta
aaacctgcacccaaagctgggaagaagcaggggagtaatatctttgcagccctagtagag
gatcaaagtgatgacgaagaagaagaagagcaggtatccaaccaggtggatgagaaaaaa
caaagtaaagggaagaaaaatgtgaaaggaaaacataaggctcctgaagaaagaccagaa
agtgaggaggatattcctaaggagaaatcaaagggcaaaaaacctgtccccagtgctgct
tctgttaatgaagaagatgagaaaaaaactgagaaggggaataagaaatcaaaaccaagt
cagaaacctgtctccaaggctgcatctgttgagtctgatgaagagaaaaaacctgagaag
gggagtaaaaaaacaaaaccaagccagaatcggtttggtgccttagacatagaggaagat
catgtcagtggaggatcaaaagaagggtcaggtgatgagggtgagacagaagacaagaca
accgctgctgaagatccttttgccaatttaagcaaaaaggagaaaaagaagaaaaaaaaa
atgctggaatatgagaaacaagtggctactatgaagaagataactgctgcagaaaatgac
ttctctgtgtcacaagcagaactgtcatcacgacaagccatgctggaaaatgcttcagat
ataaagatagaaaaattcagcatttctgcccacgggaaggagttgtttgttaatgccgat
ttatatgtggtagcaggtcggcgctatggattggttgggcctaatgggaaaggcaaaacc
actctcctaaaacacatagcaaacaaggcactgaacatacccccaaacattgatgtcttg
ctgtgtgagcaagaggttgttgctgatgacacacctgcagtccaggctgtgcttaaagct
gataagaagcgactaaagttgctagaggaggagagaaaactgcaaacccgacttgaaaag
ggggatgacaatgctgccgaaagattagaaaaggtgtatgaggagttaagagctatgggg
gctgcatctgccgaggccaaggcgcgcaggattctggctggtcttggcttcacgcctgaa
atgcaggacagagaaacccgtcgatttagtggaggttggagaatgagagtctctttggcc
agagctctcttcatggagccaactctactgatgctggatgaacctaccaatcacttggat
ctcaatgctgttatttggcttaacaattaccttcagggctggaagaaaactcttttaatt
gtgtcccacgatcaagggttcttagatgatgtctgtacggatataatgcacctggattca
cagaagctgtattattatcgaggcaactacatgacatttaagaagatgtaccagcaaaag
cagaaggaactgcagaaacagtatgacaagcaagagaaaaaactcaaagacttaaaagca
ggaggaaagtcagctaaacaagcggagaagcagacaaaagaggcactaactcgcaagcag
cagaagtgtcagaagaagaacaatgacaaggaagacaatgatcctgttgaattactaaag
aggcccaaggaatatactgtgaaattcacttttccaaatccacctccactcagccctcca
attttgggtcttcatggtgtggatttttgttattctggacaaaagccactgttcaaaaac
ttggattttggcatagacatggactctagagtgtgtattgtgggccccaatggagtaggg
aagagtacactgctcttgctgctgactggaaaacttactcctaccaaaggagaaatgaga
aaaaatcacagactgaaaataggattctttaaccagcaatatgcagatcagctaaacatg
gaggagacagctacagaatatctacaacgcaatttcaatcttccatatcaggatgcacgc
aaatgtctgggaaggtttggtctagaaagccatgcacataccatccagatctgcaagctg
tcaggagggcagaaagctagagtggtttttgctgagctgtgttgcagggaacctgacgta
ttaattttagatgaacccaccaataacctagatatagagtcaatagatgctcttgcggaa
gcggtgaatgaatataaaggagctgttatcacagtgagccatgacgcccggcttattaca
gagacgaactgtcacttgtgggtggtagaggaccagactgtaaatcaaatagagggtgat
tttgatgactataagagagaggtcttggagagcctgggagaagtgatagtgaacaaacca
cgggagagggactaa
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