Xenopus tropicalis (tropical clawed frog): 100490134
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Entry
100490134 CDS
T01011
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100490134 (lingo2)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100490134 (lingo2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_EndoS
V-set
LRRNT
Ig_C17orf99
LRR_9
Ig_6
C2-set_3
LRR_6
Motif
Other DBs
NCBI-GeneID:
100490134
NCBI-ProteinID:
XP_004910881
Xenbase:
XB-GENE-922286
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Position
1:complement(122842785..122968964)
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AA seq
612 aa
AA seq
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MGGVMLHTATPCWHILCLVAMLLVFMGSAFGCPAKCECSAQNKSVSCHRRRLVTIPEGIP
IETKILDLSKNKLKSVNPVDFVSYPLLEDIDLSDNIISNVEPGAFNSLFNLRSLSLKGNR
LKLVPLGVFTGLSNLTKLDISENKIVILLDYMFQDLHSLKSLEVGDNELVYISHRAFSGL
VSLEQLTLEKCNLTAVPTDALSHLHNLYSLHLKYLNINVLPPFAFKRLFHLKILEISYWP
LLDLVPANSLYGLNLTFLSITNTNLSTIPYHALKHLIYLTHLNLSYNPIGIIDTGVFSDL
VRLQELHLVGAQLRTIEPHAFQGLRFLRLLNVSQNLLETLEENAFQSPKALEVLCIDDNP
LVCDCRLIWMLQRHPMLHFGGQQPMCSSPDSLKESSYKVLDAAVLSFYFTCKKPKIRDRE
MLQVHVDEGQRVQMNCNADGDPQPMISWVTPRRRTVSLKSNGRTTVLGNGTLEIRYAQIQ
DTGTYICVASNAAGNDTFSASLTVKGFVPDRSYTNMTPMFITELNETSTNGTNANMTFNL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKASIDLEYVPRKNNGAVVEADVS
VTAPRRFNMKMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagtcatgcttcacacggccacaccttgctggcatatactttgtttggtggcc
atgctcttggtctttatggggtctgcttttggttgtccagcaaagtgtgagtgctcagca
caaaacaaatctgtcagttgccatcgtaggcgtcttgtgacaatcccagagggcatccct
attgagactaaaattctggatttaagcaaaaacaaactgaaaagtgtgaatccagtggat
tttgtgtcctaccctttgctagaggatatagaccttagcgacaacatcatatcaaatgtg
gagcctggtgcttttaatagtcttttcaacttgcgttcattgagtttaaaaggaaataga
ttaaaactagttcccttgggggtgttcacaggtttgtcaaatttaactaagctggatata
agtgaaaacaaaatagttattttactagactacatgtttcaggatctgcacagtttaaag
tcccttgaagttggagataatgaattggtttatatttctcatagagctttcagcggattg
gttagcctggagcagctgactttggaaaaatgtaacttaacagcagtaccaacggatgct
ctttcacatcttcacaatctttatagtctacatttgaaatatctcaacattaatgtgttg
cctccatttgcctttaagagattgtttcatctaaaaattctggagatcagttactggcct
cttttagacttggtgcctgctaatagcttgtatggtctgaacctcacatttctctcaatc
accaataccaatctgtctacaataccttatcatgctttaaaacacttaatttatctaaca
cacttgaacctctcctataatcctataggcataattgacacaggtgtgttttcagacttg
gtgcgccttcaagaactgcacttggtaggagctcaactgaggaccattgaaccacatgct
ttccaagggcttcggttcttgcgcttacttaatgtgtctcaaaacctgttggaaacttta
gaagaaaatgcttttcaatctcctaaagctttggaagttctttgcattgatgataatccc
ttagtttgtgattgccgtctcatatggatgctacaaagacatcccatgttgcactttggg
gggcaacagcctatgtgttctagcccagacagtttaaaagaaagttcatataaggtgcta
gatgctgctgtattatctttttacttcacttgtaaaaagcctaaaattcgagacagggaa
atgctgcaggttcatgtggatgaggggcagagggtgcagatgaactgcaatgctgatgga
gacccacaaccaatgatttcatgggtgacaccacgtagaaggacagtctctctaaaatct
aatggaagaaccactgtgctcggtaatggcactctagaaattcgatatgcccagattcaa
gacacaggaacctacatttgtgttgcaagcaatgctgctggaaatgacactttctcagct
tcgcttactgtcaaaggatttgtccctgatcgttcctatacaaatatgaccccaatgttt
ataacagagttaaatgagaccagcacaaatggtactaatgcaaatatgacttttaatcta
gaccttaaaacaatcctggtttctacagctatgggctgtttcacattcctcggagtggtt
ttgttttgtttccttctactttttgtgtggagccgagggaaagggaagcataaagccagc
attgacctggagtatgtcccacggaaaaacaatggtgctgtagtggaagctgatgtttca
gtcactgcacccaggagatttaatatgaaaatgatttag
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