Xenopus tropicalis (tropical clawed frog): 100490138
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Entry
100490138 CDS
T01011
Symbol
abcb9
Name
(RefSeq) ATP-binding cassette sub-family B member 9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100490138 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100490138 (abcb9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100490138 (abcb9)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100490138 (abcb9)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
AAA_30
ABC_membrane_3
AAA_21
nSTAND1
AAA_29
ABC_ATPase
AAA_23
SbcC_Walker_B
AAA_15
Motif
Other DBs
NCBI-GeneID:
100490138
NCBI-ProteinID:
XP_002935231
Xenbase:
XB-GENE-1002811
UniProt:
A0A6I8Q7N1
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All DBs
Position
1:161402343..161429983
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AA seq
785 aa
AA seq
DB search
MTMYKVTLCTLAFTACDLILSSILYICSCKKPSIIQDVLGFNMFYSMLDVWGTSILRVCI
CVGAVIGVLRNRKQGPQRLKASIIAITLLCYLIAAYTMIKLLLYSEYEKPVQDHWFWSLL
AWTWISSAGTLCLWIQMSKIVPYWENCRLHSHSNGNQDQEHSNNQTQKTKTKLSGTNIGK
LLSYSKQDAVYLILAFFFLLLCTLGEIFSPYYTGLVIDGIVVQRSLEQFSSAIVLLTLLA
VASAFSSGVRGGLFTFTFARLNIRIRNLLFRSLLSQEIGFFDENHTGDIISRLTSDTTIV
SDVVSENVNIFLRSLVKAVGVIAFMFSLSWQLSLLTFMGFPLIIMVSRVYGKYYKKLAKE
VQTALAQANSIAEETISSMKTVRSFANEDTEACVYKERLQQVYALHKKEAIAYTYYVWST
GFTQLVLQISILYYGGHLVISEQMTSGNLISFVIYEFLLGGCMESVGSVYGGLMQGVGAA
EKVFEFIDRKPKMENNGTLAPEHLEGKVEFRNVTFSYPTRPTSLVLQNLSFNLYPGKITA
LVGPSGSGKSSCVNILENFYSVQDGEVLLDGQPIKMYDHKYLHAKISMVSQEPVLFARSI
ENNISYGLNSVPLESVVSAAKRANAHSFIMELQEGYNTEAGEKGAQLSGGQKQRVAVARS
LIRNPQVLILDEATSALDAESEHAIQQAMNSDLQNRTVLIVAHRLSTIEKAHNIIVLDKG
QMVQQGSHSELMEQGGLYSHLVQRQVSGIEPASEEKGSYQGTHQCRAHCSIMELPHSPSA
VDIRL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtataaagtaactctctgcactcttgcattcactgcatgtgaccttattttg
tcctccattttgtacatatgcagttgtaaaaagcccagcattatacaagatgtactgggt
tttaatatgttttattcaatgctggatgtttgggggacttcaatactcagggtttgcata
tgtgttggtgctgtgattggtgtcttaagaaacagaaaacaaggcccccaaagacttaaa
gcttctataatagcaataaccttgttatgctacctcattgctgcctacactatgataaag
ctgctgctatattctgagtatgaaaagccagtacaggatcactggttttggagtcttctt
gcatggacttggatatcatcagccggtacactttgcttgtggattcagatgagtaagatt
gtcccatactgggaaaactgcaggctgcattctcacagtaatggtaaccaggatcaggag
cacagcaacaaccaaacacagaagacaaaaacgaaactttctggaacaaatataggaaaa
ttgttgtcctattccaaacaagatgctgtataccttatcttagcttttttctttcttctt
ctatgcactttaggagaaatatttagtccatattacacagggctggtcatagatgggatt
gttgtccaaagaagtttggagcagttttccagtgcaattgttcttctgacactcctggct
gttgcaagtgcattctcctctggagtacgagggggtctatttacctttacttttgccaga
ctgaacatccgtatacgtaacctgctctttcgctcactgctgtctcaagaaattggtttc
tttgatgagaaccacactggagacatcatctctcgtttaacctctgatacaaccattgtc
agtgatgtggtttctgagaatgtaaacatcttcctgcgtagcctggttaaagcagtagga
gtgattgccttcatgttcagcctgtcatggcagctctccctactgacttttatgggtttc
cccctcatcatcatggtttctagggtgtatggcaaatattacaagaaacttgctaaagaa
gtccagacagctcttgcacaagccaacagcatcgcagaggagacaatttcttccatgaaa
actgttcgtagttttgcaaatgaagatactgaagcctgtgtgtacaaagagagactgcag
caagtctatgccctgcacaaaaaagaggccattgcatatacatattatgtatggtctact
gggttcactcaactggtgttgcagattagcattttgtactatggaggtcacttggttatt
tcagaacaaatgaccagcggtaaccttatttcctttgttatttatgaatttctcctgggc
ggatgcatggagtctgttggctctgtctatggcgggttgatgcagggcgttggagctgca
gaaaaagtgtttgagttcattgatcgaaaaccaaaaatggaaaataatgggaccttggct
cctgaacatttggagggtaaagtggagtttagaaatgtcactttctcataccccacaagg
cccacctctttggtgttgcagaacttgtcctttaatctgtatcctggcaaaattactgcc
ctggtgggtccctctggaagtggaaaaagctcttgtgtgaatatcttagagaatttctat
tctgtgcaagatggagaagttttactagacggtcagcctattaaaatgtatgaccacaag
tatcttcatgcaaagatatccatggttagtcaagagccggtgctctttgcacgttccatt
gagaataatatttcctatggactgaattctgtgccattggaatcagttgtaagtgctgca
aaaagagccaatgcacactctttcatcatggagcttcaagaaggatataacacagaagcc
ggagagaagggtgcccagttatctgggggccagaaacagagagtggcagtagcacgttct
ttaatccgaaatcctcaagtgctgatactggatgaagcaacaagtgcacttgatgctgaa
agcgagcatgctatccagcaagcaatgaacagtgacctacagaaccgcacagtgctaata
gtagctcacaggctgagcactatagaaaaagcacacaacataattgttctagacaagggc
cagatggtacagcagggtagccacagtgagctgatggaacaaggaggactttattcacat
cttgttcagcggcaagtctcagggattgaacctgcttcagaagaaaaaggatcataccag
ggcacccatcagtgcagagcccactgcagtatcatggagctaccccacagtccgtctgct
gtagatatacgactatag
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