Xenopus tropicalis (tropical clawed frog): 100490143
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Entry
100490143 CDS
T01011
Symbol
irf4
Name
(RefSeq) interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100490143 (irf4)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100490143 (irf4)
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GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
100490143
NCBI-ProteinID:
XP_002936464
Xenbase:
XB-GENE-988321
UniProt:
F6YQM4
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Position
6:complement(87204344..87218177)
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AA seq
443 aa
AA seq
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MHQDGDCGMTPLSCGNGKLRQWLIDQIDSGKYPGLVWENEERSIFRIPWKHAGKQDYNRE
EDAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVY
KIIPEGSKKGLKQHGSEDSQVIVSHPFPVPPSYSSLPTHPQVSNFILPHERNWRDFAPEQ
PHPELPYQCTAVPFAARSHLWQNASCENNYQVTGSFYACTPTEAQTIDPGIRSGEAIAFS
DCRLHISLYYRDTLVEERTTVSQEGCRISHGHCYDISRLEQVVFPYPEDSSLRKNIEKVL
SHLDRGVILWLAPDGMYARRMCQSRIYWEGPLSMYSDRPNKLERDIACKLFDTQQFLSEL
QAYALHGRPVPRFQIVLCFGEEFPDAQRGRKLITAHVEPVFARQLVGFAEQNGGHFMRGY
DFTDHISSSDEYHRTVRQAPLQE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaagacggagactgtggaatgacaccacttagttgtggaaacggaaagctaagg
cagtggttgattgaccaaattgacagtggaaaataccctggattggtgtgggaaaatgag
gaaagaagtatttttcgtattccttggaaacatgcaggaaaacaggattataaccgagaa
gaggacgctgctctctttaaggcctgggccctttttaaaggtaaatacagagagggcatt
gataaaccagatcctccaacatggaagacaagactgcgctgtgccttaaacaagagcaat
gactttgaagagctggtggaaaggagtcagctggatatttccgacccatataaggtgtac
aagattatcccagaaggttcaaagaaaggattaaagcaacatggctcagaggattcacag
gtcattgtgagccacccatttccggttccaccttcatactcttctctgcccactcaccct
caggtgtcaaacttcatcctacctcatgagcgtaactggagagactttgcaccagaacaa
ccacatcctgagcttccttaccagtgcactgctgtcccctttgcagcacgtagtcactta
tggcaaaatgcttcttgtgaaaataattaccaagtaactggatccttttatgcatgtacg
ccaacggaagcacagaccatagatccaggcataaggtctggtgaggccattgcattctca
gattgccgactgcacatcagcttatactatagggatacccttgttgaagaaagaaccaca
gtaagtcaagaaggctgcaggatctcacatggacattgctatgacatcagtcgcttggag
caagttgttttcccatatccagaagacagcagcctgaggaagaatatagaaaaagtacta
agccatctggataggggtgtaatcctttggctggcccctgatggaatgtacgcaaggagg
atgtgccagagcaggatctactgggagggacctttgtccatgtatagtgaccgaccaaat
aaattagaacgagacattgcctgcaaactatttgatactcagcagttcttatcagaactg
caggcatatgctcttcatggacgtcctgtgccaagatttcagattgttttatgtttcggg
gaagaattcccagatgcacaaagaggaaggaaattaattacagctcatgttgagccagtg
tttgctagacaactggttggctttgcagaacaaaatggaggacattttatgagaggatat
gatttcacagaccatattagcagctcagatgaatatcacaggacagtacgtcaagctcca
ctgcaggaatga
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